Gene : Eucgr.K03258 E. grandis v2.0
Defline:  (1 of 1) PTHR12383:SF5 - PEPTIDASE-S24/S26 DOMAIN-CONTAINING PROTEIN Genomic Order:  2711
Name:  ? Eucgr.K03258 Secondary Identifier:  ? PAC:32067717
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03258 0.5kb upstream 0.5kb upstream 8019 true Chr11: 40684602-40692620 Eucalyptus grandis
Eucgr.K03258 0.5kb upstream 0.5kb upstream 500 false Chr11: 40692121-40692620 Eucalyptus grandis
Eucgr.K03258 0.5kb downstream 0.5kb downstream 8019 true Chr11: 40684102-40692120 Eucalyptus grandis
Eucgr.K03258 0.5kb downstream 0.5kb downstream 500 false Chr11: 40684102-40684601 Eucalyptus grandis
Eucgr.K03258 1.0kb upstream 1.0kb upstream 8519 true Chr11: 40684602-40693120 Eucalyptus grandis
Eucgr.K03258 1.0kb upstream 1.0kb upstream 1000 false Chr11: 40692121-40693120 Eucalyptus grandis
Eucgr.K03258 1.0kb downstream 1.0kb downstream 8519 true Chr11: 40683602-40692120 Eucalyptus grandis
Eucgr.K03258 1.0kb downstream 1.0kb downstream 1000 false Chr11: 40683602-40684601 Eucalyptus grandis
Eucgr.K03258 2.0kb upstream 2.0kb upstream 9519 true Chr11: 40684602-40694120 Eucalyptus grandis
Eucgr.K03258 2.0kb upstream 2.0kb upstream 2000 false Chr11: 40692121-40694120 Eucalyptus grandis
Eucgr.K03258 2.0kb downstream 2.0kb downstream 9519 true Chr11: 40682602-40692120 Eucalyptus grandis
Eucgr.K03258 2.0kb downstream 2.0kb downstream 2000 false Chr11: 40682602-40684601 Eucalyptus grandis
Eucgr.K03258 5.0kb upstream 5.0kb upstream 12519 true Chr11: 40684602-40697120 Eucalyptus grandis
Eucgr.K03258 5.0kb upstream 5.0kb upstream 5000 false Chr11: 40692121-40697120 Eucalyptus grandis
Eucgr.K03258 5.0kb downstream 5.0kb downstream 12519 true Chr11: 40679602-40692120 Eucalyptus grandis
Eucgr.K03258 5.0kb downstream 5.0kb downstream 5000 false Chr11: 40679602-40684601 Eucalyptus grandis
Eucgr.K03258 10.0kb upstream 10.0kb upstream 17519 true Chr11: 40684602-40702120 Eucalyptus grandis
Eucgr.K03258 10.0kb upstream 10.0kb upstream 10000 false Chr11: 40692121-40702120 Eucalyptus grandis
Eucgr.K03258 10.0kb downstream 10.0kb downstream 17519 true Chr11: 40674602-40692120 Eucalyptus grandis
Eucgr.K03258 10.0kb downstream 10.0kb downstream 10000 false Chr11: 40674602-40684601 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065093 5270 Rosid View MSA
123753378 5271 Pentapetalae View MSA
122790415 5272 Eudicot View MSA
122044247 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121345386 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3591 0.0 45.499    
cufflinks 19.2178 0.0 43.0329    
cufflinks 19.1096 0.0 42.7679    
cufflinks 21.157 0.0 47.1134    
cufflinks 30.8722 0.0 68.3264   High
cufflinks 14.8644 0.0 33.7516   Low

0 Strain