Gene : Eucgr.L01307 E. grandis v2.0
Defline:  (1 of 3) PTHR21668 - EIF-1A Genomic Order:  4
Name:  ? Eucgr.L01307 Secondary Identifier:  ? PAC:32032013
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01307 0.5kb upstream 0.5kb upstream 1378 true scaffold_162: 44225-45602 Eucalyptus grandis
Eucgr.L01307 0.5kb upstream 0.5kb upstream 500 false scaffold_162: 45103-45602 Eucalyptus grandis
Eucgr.L01307 0.5kb downstream 0.5kb downstream 1378 true scaffold_162: 43725-45102 Eucalyptus grandis
Eucgr.L01307 0.5kb downstream 0.5kb downstream 500 false scaffold_162: 43725-44224 Eucalyptus grandis
Eucgr.L01307 1.0kb upstream 1.0kb upstream 1878 true scaffold_162: 44225-46102 Eucalyptus grandis
Eucgr.L01307 1.0kb upstream 1.0kb upstream 1000 false scaffold_162: 45103-46102 Eucalyptus grandis
Eucgr.L01307 1.0kb downstream 1.0kb downstream 1878 true scaffold_162: 43225-45102 Eucalyptus grandis
Eucgr.L01307 1.0kb downstream 1.0kb downstream 1000 false scaffold_162: 43225-44224 Eucalyptus grandis
Eucgr.L01307 2.0kb upstream 2.0kb upstream 2878 true scaffold_162: 44225-47102 Eucalyptus grandis
Eucgr.L01307 2.0kb upstream 2.0kb upstream 2000 false scaffold_162: 45103-47102 Eucalyptus grandis
Eucgr.L01307 2.0kb downstream 2.0kb downstream 2878 true scaffold_162: 42225-45102 Eucalyptus grandis
Eucgr.L01307 2.0kb downstream 2.0kb downstream 2000 false scaffold_162: 42225-44224 Eucalyptus grandis
Eucgr.L01307 5.0kb upstream 5.0kb upstream 5878 true scaffold_162: 44225-50102 Eucalyptus grandis
Eucgr.L01307 5.0kb upstream 5.0kb upstream 5000 false scaffold_162: 45103-50102 Eucalyptus grandis
Eucgr.L01307 5.0kb downstream 5.0kb downstream 5878 true scaffold_162: 39225-45102 Eucalyptus grandis
Eucgr.L01307 5.0kb downstream 5.0kb downstream 5000 false scaffold_162: 39225-44224 Eucalyptus grandis
Eucgr.L01307 10.0kb upstream 10.0kb upstream 10878 true scaffold_162: 44225-55102 Eucalyptus grandis
Eucgr.L01307 10.0kb upstream 10.0kb upstream 10000 false scaffold_162: 45103-55102 Eucalyptus grandis
Eucgr.L01307 10.0kb downstream 10.0kb downstream 10878 true scaffold_162: 34225-45102 Eucalyptus grandis
Eucgr.L01307 10.0kb downstream 10.0kb downstream 10000 false scaffold_162: 34225-44224 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124052270 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.96397 0.0 14.5412    
cufflinks 6.95159 0.0 19.4587    
cufflinks 4.55119 0.0 13.5046    
cufflinks 10.8696 0.0 29.2817   High
cufflinks 12.742 0.0 33.7677   High
cufflinks 4.30975 0.0 13.0157    

0 Strain