Gene : Eucgr.L01254 E. grandis v2.0
Defline:  (1 of 2) PTHR22952:SF146 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  3
Name:  ? Eucgr.L01254 Secondary Identifier:  ? PAC:32057900
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01254 0.5kb upstream 0.5kb upstream 1429 true scaffold_149: 14754-16182 Eucalyptus grandis
Eucgr.L01254 0.5kb upstream 0.5kb upstream 500 false scaffold_149: 14754-15253 Eucalyptus grandis
Eucgr.L01254 0.5kb downstream 0.5kb downstream 1429 true scaffold_149: 15254-16682 Eucalyptus grandis
Eucgr.L01254 0.5kb downstream 0.5kb downstream 500 false scaffold_149: 16183-16682 Eucalyptus grandis
Eucgr.L01254 1.0kb upstream 1.0kb upstream 1929 true scaffold_149: 14254-16182 Eucalyptus grandis
Eucgr.L01254 1.0kb upstream 1.0kb upstream 1000 false scaffold_149: 14254-15253 Eucalyptus grandis
Eucgr.L01254 1.0kb downstream 1.0kb downstream 1929 true scaffold_149: 15254-17182 Eucalyptus grandis
Eucgr.L01254 1.0kb downstream 1.0kb downstream 1000 false scaffold_149: 16183-17182 Eucalyptus grandis
Eucgr.L01254 2.0kb upstream 2.0kb upstream 2929 true scaffold_149: 13254-16182 Eucalyptus grandis
Eucgr.L01254 2.0kb upstream 2.0kb upstream 2000 false scaffold_149: 13254-15253 Eucalyptus grandis
Eucgr.L01254 2.0kb downstream 2.0kb downstream 2929 true scaffold_149: 15254-18182 Eucalyptus grandis
Eucgr.L01254 2.0kb downstream 2.0kb downstream 2000 false scaffold_149: 16183-18182 Eucalyptus grandis
Eucgr.L01254 5.0kb upstream 5.0kb upstream 5929 true scaffold_149: 10254-16182 Eucalyptus grandis
Eucgr.L01254 5.0kb upstream 5.0kb upstream 5000 false scaffold_149: 10254-15253 Eucalyptus grandis
Eucgr.L01254 5.0kb downstream 5.0kb downstream 5929 true scaffold_149: 15254-21182 Eucalyptus grandis
Eucgr.L01254 5.0kb downstream 5.0kb downstream 5000 false scaffold_149: 16183-21182 Eucalyptus grandis
Eucgr.L01254 10.0kb upstream 10.0kb upstream 10929 true scaffold_149: 5254-16182 Eucalyptus grandis
Eucgr.L01254 10.0kb upstream 10.0kb upstream 10000 false scaffold_149: 5254-15253 Eucalyptus grandis
Eucgr.L01254 10.0kb downstream 10.0kb downstream 10929 true scaffold_149: 15254-26182 Eucalyptus grandis
Eucgr.L01254 10.0kb downstream 10.0kb downstream 10000 false scaffold_149: 16183-26182 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070376 5270 Rosid View MSA
123739534 5271 Pentapetalae View MSA
122793747 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.7832 0.0 65.2084 High  
cufflinks 18.5775 0.0 43.8135    
cufflinks 27.4089 0.0 62.4957 High  
cufflinks 31.913 0.0 72.1795   High
cufflinks 17.1342 0.0 40.5501   Low
cufflinks 19.1654 0.0 44.5569    

0 Strain