Gene : Eucgr.K03602 E. grandis v2.0
Defline:  (1 of 2) PTHR13516:SF3 - ALBA DNA/RNA-BINDING PROTEIN Genomic Order:  3021
Name:  ? Eucgr.K03602 Secondary Identifier:  ? PAC:32069346
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.K03602 0.5kb upstream 0.5kb upstream 4264 true Chr11: 44643276-44647539 Eucalyptus grandis
Eucgr.K03602 0.5kb upstream 0.5kb upstream 500 false Chr11: 44643276-44643775 Eucalyptus grandis
Eucgr.K03602 0.5kb downstream 0.5kb downstream 4264 true Chr11: 44643776-44648039 Eucalyptus grandis
Eucgr.K03602 0.5kb downstream 0.5kb downstream 500 false Chr11: 44647540-44648039 Eucalyptus grandis
Eucgr.K03602 1.0kb upstream 1.0kb upstream 4764 true Chr11: 44642776-44647539 Eucalyptus grandis
Eucgr.K03602 1.0kb upstream 1.0kb upstream 1000 false Chr11: 44642776-44643775 Eucalyptus grandis
Eucgr.K03602 1.0kb downstream 1.0kb downstream 4764 true Chr11: 44643776-44648539 Eucalyptus grandis
Eucgr.K03602 1.0kb downstream 1.0kb downstream 1000 false Chr11: 44647540-44648539 Eucalyptus grandis
Eucgr.K03602 2.0kb upstream 2.0kb upstream 5764 true Chr11: 44641776-44647539 Eucalyptus grandis
Eucgr.K03602 2.0kb upstream 2.0kb upstream 2000 false Chr11: 44641776-44643775 Eucalyptus grandis
Eucgr.K03602 2.0kb downstream 2.0kb downstream 5764 true Chr11: 44643776-44649539 Eucalyptus grandis
Eucgr.K03602 2.0kb downstream 2.0kb downstream 2000 false Chr11: 44647540-44649539 Eucalyptus grandis
Eucgr.K03602 5.0kb upstream 5.0kb upstream 8764 true Chr11: 44638776-44647539 Eucalyptus grandis
Eucgr.K03602 5.0kb upstream 5.0kb upstream 5000 false Chr11: 44638776-44643775 Eucalyptus grandis
Eucgr.K03602 5.0kb downstream 5.0kb downstream 8764 true Chr11: 44643776-44652539 Eucalyptus grandis
Eucgr.K03602 5.0kb downstream 5.0kb downstream 5000 false Chr11: 44647540-44652539 Eucalyptus grandis
Eucgr.K03602 10.0kb upstream 10.0kb upstream 13764 true Chr11: 44633776-44647539 Eucalyptus grandis
Eucgr.K03602 10.0kb upstream 10.0kb upstream 10000 false Chr11: 44633776-44643775 Eucalyptus grandis
Eucgr.K03602 10.0kb downstream 10.0kb downstream 13764 true Chr11: 44643776-44657539 Eucalyptus grandis
Eucgr.K03602 10.0kb downstream 10.0kb downstream 10000 false Chr11: 44647540-44657539 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070667 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.8276 0.0 77.9661 High  
cufflinks 54.5659 0.0 120.781 High High
cufflinks 27.1331 0.0 61.4398 High  
cufflinks 34.4156 0.0 76.9107    
cufflinks 35.9576 0.0 80.312    
cufflinks 16.2337 0.0 38.449   Low

0 Strain