Gene : Eucgr.L01560 E. grandis v2.0
Defline:  (1 of 20) PF07939 - Protein of unknown function (DUF1685) Genomic Order:  1
Name:  ? Eucgr.L01560 Secondary Identifier:  ? PAC:32057897
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01560 0.5kb upstream 0.5kb upstream 1253 true scaffold_253: 11745-12997 Eucalyptus grandis
Eucgr.L01560 0.5kb upstream 0.5kb upstream 500 false scaffold_253: 12498-12997 Eucalyptus grandis
Eucgr.L01560 0.5kb downstream 0.5kb downstream 1253 true scaffold_253: 11245-12497 Eucalyptus grandis
Eucgr.L01560 0.5kb downstream 0.5kb downstream 500 false scaffold_253: 11245-11744 Eucalyptus grandis
Eucgr.L01560 1.0kb upstream 1.0kb upstream 1753 true scaffold_253: 11745-13497 Eucalyptus grandis
Eucgr.L01560 1.0kb upstream 1.0kb upstream 1000 false scaffold_253: 12498-13497 Eucalyptus grandis
Eucgr.L01560 1.0kb downstream 1.0kb downstream 1753 true scaffold_253: 10745-12497 Eucalyptus grandis
Eucgr.L01560 1.0kb downstream 1.0kb downstream 1000 false scaffold_253: 10745-11744 Eucalyptus grandis
Eucgr.L01560 2.0kb upstream 2.0kb upstream 2753 true scaffold_253: 11745-14497 Eucalyptus grandis
Eucgr.L01560 2.0kb upstream 2.0kb upstream 2000 false scaffold_253: 12498-14497 Eucalyptus grandis
Eucgr.L01560 2.0kb downstream 2.0kb downstream 2753 true scaffold_253: 9745-12497 Eucalyptus grandis
Eucgr.L01560 2.0kb downstream 2.0kb downstream 2000 false scaffold_253: 9745-11744 Eucalyptus grandis
Eucgr.L01560 5.0kb upstream 5.0kb upstream 5753 true scaffold_253: 11745-17497 Eucalyptus grandis
Eucgr.L01560 5.0kb upstream 5.0kb upstream 5000 false scaffold_253: 12498-17497 Eucalyptus grandis
Eucgr.L01560 5.0kb downstream 5.0kb downstream 5753 true scaffold_253: 6745-12497 Eucalyptus grandis
Eucgr.L01560 5.0kb downstream 5.0kb downstream 5000 false scaffold_253: 6745-11744 Eucalyptus grandis
Eucgr.L01560 10.0kb upstream 10.0kb upstream 10753 true scaffold_253: 11745-22497 Eucalyptus grandis
Eucgr.L01560 10.0kb upstream 10.0kb upstream 10000 false scaffold_253: 12498-22497 Eucalyptus grandis
Eucgr.L01560 10.0kb downstream 10.0kb downstream 10753 true scaffold_253: 1745-12497 Eucalyptus grandis
Eucgr.L01560 10.0kb downstream 10.0kb downstream 10000 false scaffold_253: 1745-11744 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069452 5270 Rosid View MSA
123750929 5271 Pentapetalae View MSA
122791685 5272 Eudicot View MSA
122049141 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0475311 0.0 0.352648 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain