Gene : Eucgr.L01527 E. grandis v2.0
Defline:  (1 of 3) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase Genomic Order:  1
Name:  ? Eucgr.L01527 Secondary Identifier:  ? PAC:32027622
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6829 Eucalyptus grandis pathologic  
Egrandis PWY-7283 Eucalyptus grandis pathologic  
Egrandis PWY-7286 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01527 0.5kb upstream 0.5kb upstream 5598 true scaffold_237: 3667-9264 Eucalyptus grandis
Eucgr.L01527 0.5kb upstream 0.5kb upstream 500 false scaffold_237: 3667-4166 Eucalyptus grandis
Eucgr.L01527 0.5kb downstream 0.5kb downstream 5598 true scaffold_237: 4167-9764 Eucalyptus grandis
Eucgr.L01527 0.5kb downstream 0.5kb downstream 500 false scaffold_237: 9265-9764 Eucalyptus grandis
Eucgr.L01527 1.0kb upstream 1.0kb upstream 6098 true scaffold_237: 3167-9264 Eucalyptus grandis
Eucgr.L01527 1.0kb upstream 1.0kb upstream 1000 false scaffold_237: 3167-4166 Eucalyptus grandis
Eucgr.L01527 1.0kb downstream 1.0kb downstream 6098 true scaffold_237: 4167-10264 Eucalyptus grandis
Eucgr.L01527 1.0kb downstream 1.0kb downstream 1000 false scaffold_237: 9265-10264 Eucalyptus grandis
Eucgr.L01527 2.0kb upstream 2.0kb upstream 7098 true scaffold_237: 2167-9264 Eucalyptus grandis
Eucgr.L01527 2.0kb upstream 2.0kb upstream 2000 false scaffold_237: 2167-4166 Eucalyptus grandis
Eucgr.L01527 2.0kb downstream 2.0kb downstream 7098 true scaffold_237: 4167-11264 Eucalyptus grandis
Eucgr.L01527 2.0kb downstream 2.0kb downstream 2000 false scaffold_237: 9265-11264 Eucalyptus grandis
Eucgr.L01527 5.0kb upstream 5.0kb upstream 9264 true scaffold_237: 1-9264 Eucalyptus grandis
Eucgr.L01527 5.0kb upstream 5.0kb upstream 4166 false scaffold_237: 1-4166 Eucalyptus grandis
Eucgr.L01527 5.0kb downstream 5.0kb downstream 10098 true scaffold_237: 4167-14264 Eucalyptus grandis
Eucgr.L01527 5.0kb downstream 5.0kb downstream 5000 false scaffold_237: 9265-14264 Eucalyptus grandis
Eucgr.L01527 10.0kb upstream 10.0kb upstream 9264 true scaffold_237: 1-9264 Eucalyptus grandis
Eucgr.L01527 10.0kb upstream 10.0kb upstream 4166 false scaffold_237: 1-4166 Eucalyptus grandis
Eucgr.L01527 10.0kb downstream 10.0kb downstream 15098 true scaffold_237: 4167-19264 Eucalyptus grandis
Eucgr.L01527 10.0kb downstream 10.0kb downstream 10000 false scaffold_237: 9265-19264 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065435 5270 Rosid View MSA
123747956 5271 Pentapetalae View MSA
122788813 5272 Eudicot View MSA
122045692 5273 Angiosperm View MSA
121347346 5274 Embryophyte View MSA
123426085 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31573 0.0 3.66336    
cufflinks 0.192559 0.0 0.673576 Low  
cufflinks 1.10655 0.0 3.12746    
cufflinks 0.151942 0.0 0.547219 Low Low
cufflinks 0.314192 0.0 1.03659 Low  
cufflinks 1.63641 0.0 4.47596   High

0 Strain