Gene : Eucgr.L01504 E. grandis v2.0
Defline:  (1 of 3) PTHR31956:SF2 - NON-SPECIFIC PHOSPHOLIPASE C6 Genomic Order:  1
Name:  ? Eucgr.L01504 Secondary Identifier:  ? PAC:32049309
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01504 0.5kb upstream 0.5kb upstream 2620 true scaffold_231: 338-2957 Eucalyptus grandis
Eucgr.L01504 0.5kb upstream 0.5kb upstream 500 false scaffold_231: 2458-2957 Eucalyptus grandis
Eucgr.L01504 0.5kb downstream 0.5kb downstream 2457 true scaffold_231: 1-2457 Eucalyptus grandis
Eucgr.L01504 0.5kb downstream 0.5kb downstream 337 false scaffold_231: 1-337 Eucalyptus grandis
Eucgr.L01504 1.0kb upstream 1.0kb upstream 3120 true scaffold_231: 338-3457 Eucalyptus grandis
Eucgr.L01504 1.0kb upstream 1.0kb upstream 1000 false scaffold_231: 2458-3457 Eucalyptus grandis
Eucgr.L01504 1.0kb downstream 1.0kb downstream 2457 true scaffold_231: 1-2457 Eucalyptus grandis
Eucgr.L01504 1.0kb downstream 1.0kb downstream 337 false scaffold_231: 1-337 Eucalyptus grandis
Eucgr.L01504 2.0kb upstream 2.0kb upstream 4120 true scaffold_231: 338-4457 Eucalyptus grandis
Eucgr.L01504 2.0kb upstream 2.0kb upstream 2000 false scaffold_231: 2458-4457 Eucalyptus grandis
Eucgr.L01504 2.0kb downstream 2.0kb downstream 2457 true scaffold_231: 1-2457 Eucalyptus grandis
Eucgr.L01504 2.0kb downstream 2.0kb downstream 337 false scaffold_231: 1-337 Eucalyptus grandis
Eucgr.L01504 5.0kb upstream 5.0kb upstream 7120 true scaffold_231: 338-7457 Eucalyptus grandis
Eucgr.L01504 5.0kb upstream 5.0kb upstream 5000 false scaffold_231: 2458-7457 Eucalyptus grandis
Eucgr.L01504 5.0kb downstream 5.0kb downstream 2457 true scaffold_231: 1-2457 Eucalyptus grandis
Eucgr.L01504 5.0kb downstream 5.0kb downstream 337 false scaffold_231: 1-337 Eucalyptus grandis
Eucgr.L01504 10.0kb upstream 10.0kb upstream 12120 true scaffold_231: 338-12457 Eucalyptus grandis
Eucgr.L01504 10.0kb upstream 10.0kb upstream 10000 false scaffold_231: 2458-12457 Eucalyptus grandis
Eucgr.L01504 10.0kb downstream 10.0kb downstream 2457 true scaffold_231: 1-2457 Eucalyptus grandis
Eucgr.L01504 10.0kb downstream 10.0kb downstream 337 false scaffold_231: 1-337 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067209 5270 Rosid View MSA
123741370 5271 Pentapetalae View MSA
122788110 5272 Eudicot View MSA
122046381 5273 Angiosperm View MSA
121310596 5274 Embryophyte View MSA
123348041 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.64172 0.0 9.15043    
cufflinks 6.19527 0.0 14.7363    
cufflinks 4.09125 0.0 10.1678    
cufflinks 10.5565 0.0 24.0822   High
cufflinks 9.42044 0.0 21.637   High
cufflinks 2.48662 0.0 6.50851   Low

0 Strain