Gene : Eucgr.L01436 E. grandis v2.0
Defline:  (1 of 4) PTHR11785:SF267 - CATIONIC AMINO ACID TRANSPORTER 5 Genomic Order:  1
Name:  ? Eucgr.L01436 Secondary Identifier:  ? PAC:32027842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01436 0.5kb upstream 0.5kb upstream 2138 true scaffold_207: 11852-13989 Eucalyptus grandis
Eucgr.L01436 0.5kb upstream 0.5kb upstream 500 false scaffold_207: 13490-13989 Eucalyptus grandis
Eucgr.L01436 0.5kb downstream 0.5kb downstream 2138 true scaffold_207: 11352-13489 Eucalyptus grandis
Eucgr.L01436 0.5kb downstream 0.5kb downstream 500 false scaffold_207: 11352-11851 Eucalyptus grandis
Eucgr.L01436 1.0kb upstream 1.0kb upstream 2638 true scaffold_207: 11852-14489 Eucalyptus grandis
Eucgr.L01436 1.0kb upstream 1.0kb upstream 1000 false scaffold_207: 13490-14489 Eucalyptus grandis
Eucgr.L01436 1.0kb downstream 1.0kb downstream 2638 true scaffold_207: 10852-13489 Eucalyptus grandis
Eucgr.L01436 1.0kb downstream 1.0kb downstream 1000 false scaffold_207: 10852-11851 Eucalyptus grandis
Eucgr.L01436 2.0kb upstream 2.0kb upstream 3638 true scaffold_207: 11852-15489 Eucalyptus grandis
Eucgr.L01436 2.0kb upstream 2.0kb upstream 2000 false scaffold_207: 13490-15489 Eucalyptus grandis
Eucgr.L01436 2.0kb downstream 2.0kb downstream 3638 true scaffold_207: 9852-13489 Eucalyptus grandis
Eucgr.L01436 2.0kb downstream 2.0kb downstream 2000 false scaffold_207: 9852-11851 Eucalyptus grandis
Eucgr.L01436 5.0kb upstream 5.0kb upstream 6638 true scaffold_207: 11852-18489 Eucalyptus grandis
Eucgr.L01436 5.0kb upstream 5.0kb upstream 5000 false scaffold_207: 13490-18489 Eucalyptus grandis
Eucgr.L01436 5.0kb downstream 5.0kb downstream 6638 true scaffold_207: 6852-13489 Eucalyptus grandis
Eucgr.L01436 5.0kb downstream 5.0kb downstream 5000 false scaffold_207: 6852-11851 Eucalyptus grandis
Eucgr.L01436 10.0kb upstream 10.0kb upstream 11638 true scaffold_207: 11852-23489 Eucalyptus grandis
Eucgr.L01436 10.0kb upstream 10.0kb upstream 10000 false scaffold_207: 13490-23489 Eucalyptus grandis
Eucgr.L01436 10.0kb downstream 10.0kb downstream 11638 true scaffold_207: 1852-13489 Eucalyptus grandis
Eucgr.L01436 10.0kb downstream 10.0kb downstream 10000 false scaffold_207: 1852-11851 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065749 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.132439 0.0 0.502393 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0769615 0.0 0.341955 Low  

0 Strain