Gene : Eucgr.L03135 E. grandis v2.0
Defline:  (1 of 5) PTHR11387 - CYTOCHROME C OXIDASE POLYPEPTIDE VIB Genomic Order:  1
Name:  ? Eucgr.L03135 Secondary Identifier:  ? PAC:32049341
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03135 0.5kb upstream 0.5kb upstream 4430 true scaffold_2083: 1734-6163 Eucalyptus grandis
Eucgr.L03135 0.5kb upstream 0.5kb upstream 500 false scaffold_2083: 1734-2233 Eucalyptus grandis
Eucgr.L03135 0.5kb downstream 0.5kb downstream 4430 true scaffold_2083: 2234-6663 Eucalyptus grandis
Eucgr.L03135 0.5kb downstream 0.5kb downstream 500 false scaffold_2083: 6164-6663 Eucalyptus grandis
Eucgr.L03135 1.0kb upstream 1.0kb upstream 4930 true scaffold_2083: 1234-6163 Eucalyptus grandis
Eucgr.L03135 1.0kb upstream 1.0kb upstream 1000 false scaffold_2083: 1234-2233 Eucalyptus grandis
Eucgr.L03135 1.0kb downstream 1.0kb downstream 4930 true scaffold_2083: 2234-7163 Eucalyptus grandis
Eucgr.L03135 1.0kb downstream 1.0kb downstream 1000 false scaffold_2083: 6164-7163 Eucalyptus grandis
Eucgr.L03135 2.0kb upstream 2.0kb upstream 5930 true scaffold_2083: 234-6163 Eucalyptus grandis
Eucgr.L03135 2.0kb upstream 2.0kb upstream 2000 false scaffold_2083: 234-2233 Eucalyptus grandis
Eucgr.L03135 2.0kb downstream 2.0kb downstream 5930 true scaffold_2083: 2234-8163 Eucalyptus grandis
Eucgr.L03135 2.0kb downstream 2.0kb downstream 2000 false scaffold_2083: 6164-8163 Eucalyptus grandis
Eucgr.L03135 5.0kb upstream 5.0kb upstream 6163 true scaffold_2083: 1-6163 Eucalyptus grandis
Eucgr.L03135 5.0kb upstream 5.0kb upstream 2233 false scaffold_2083: 1-2233 Eucalyptus grandis
Eucgr.L03135 5.0kb downstream 5.0kb downstream 7111 true scaffold_2083: 2234-9344 Eucalyptus grandis
Eucgr.L03135 5.0kb downstream 5.0kb downstream 3181 false scaffold_2083: 6164-9344 Eucalyptus grandis
Eucgr.L03135 10.0kb upstream 10.0kb upstream 6163 true scaffold_2083: 1-6163 Eucalyptus grandis
Eucgr.L03135 10.0kb upstream 10.0kb upstream 2233 false scaffold_2083: 1-2233 Eucalyptus grandis
Eucgr.L03135 10.0kb downstream 10.0kb downstream 7111 true scaffold_2083: 2234-9344 Eucalyptus grandis
Eucgr.L03135 10.0kb downstream 10.0kb downstream 3181 false scaffold_2083: 6164-9344 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.67326 0.0 16.1486    
cufflinks 11.3767 0.0 29.7524    
cufflinks 5.36346 0.0 15.6369    
cufflinks 22.1097 0.0 52.5671    
cufflinks 32.8729 0.0 75.4594   High
cufflinks 3.90272 0.0 11.5626   Low

0 Strain