Gene : Eucgr.L01383 E. grandis v2.0
Defline:  (1 of 6) PTHR13952:SF6 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN Genomic Order:  1
Name:  ? Eucgr.L01383 Secondary Identifier:  ? PAC:32032100
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01383 0.5kb upstream 0.5kb upstream 6501 true scaffold_191: 30902-37402 Eucalyptus grandis
Eucgr.L01383 0.5kb upstream 0.5kb upstream 500 false scaffold_191: 36903-37402 Eucalyptus grandis
Eucgr.L01383 0.5kb downstream 0.5kb downstream 6501 true scaffold_191: 30402-36902 Eucalyptus grandis
Eucgr.L01383 0.5kb downstream 0.5kb downstream 500 false scaffold_191: 30402-30901 Eucalyptus grandis
Eucgr.L01383 1.0kb upstream 1.0kb upstream 7001 true scaffold_191: 30902-37902 Eucalyptus grandis
Eucgr.L01383 1.0kb upstream 1.0kb upstream 1000 false scaffold_191: 36903-37902 Eucalyptus grandis
Eucgr.L01383 1.0kb downstream 1.0kb downstream 7001 true scaffold_191: 29902-36902 Eucalyptus grandis
Eucgr.L01383 1.0kb downstream 1.0kb downstream 1000 false scaffold_191: 29902-30901 Eucalyptus grandis
Eucgr.L01383 2.0kb upstream 2.0kb upstream 8001 true scaffold_191: 30902-38902 Eucalyptus grandis
Eucgr.L01383 2.0kb upstream 2.0kb upstream 2000 false scaffold_191: 36903-38902 Eucalyptus grandis
Eucgr.L01383 2.0kb downstream 2.0kb downstream 8001 true scaffold_191: 28902-36902 Eucalyptus grandis
Eucgr.L01383 2.0kb downstream 2.0kb downstream 2000 false scaffold_191: 28902-30901 Eucalyptus grandis
Eucgr.L01383 5.0kb upstream 5.0kb upstream 11001 true scaffold_191: 30902-41902 Eucalyptus grandis
Eucgr.L01383 5.0kb upstream 5.0kb upstream 5000 false scaffold_191: 36903-41902 Eucalyptus grandis
Eucgr.L01383 5.0kb downstream 5.0kb downstream 11001 true scaffold_191: 25902-36902 Eucalyptus grandis
Eucgr.L01383 5.0kb downstream 5.0kb downstream 5000 false scaffold_191: 25902-30901 Eucalyptus grandis
Eucgr.L01383 10.0kb upstream 10.0kb upstream 16001 true scaffold_191: 30902-46902 Eucalyptus grandis
Eucgr.L01383 10.0kb upstream 10.0kb upstream 10000 false scaffold_191: 36903-46902 Eucalyptus grandis
Eucgr.L01383 10.0kb downstream 10.0kb downstream 16001 true scaffold_191: 20902-36902 Eucalyptus grandis
Eucgr.L01383 10.0kb downstream 10.0kb downstream 10000 false scaffold_191: 20902-30901 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.59909 0.0 11.4658    
cufflinks 8.95759 0.0 20.9053    
cufflinks 4.72722 0.0 11.7418    
cufflinks 16.578 0.0 37.1487    
cufflinks 23.0989 0.0 51.2667   High
cufflinks 2.32498 0.0 6.21254   Low

0 Strain