Gene : Eucgr.L01873 E. grandis v2.0
Defline:  (1 of 4) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  1
Name:  ? Eucgr.L01873 Secondary Identifier:  ? PAC:32062399
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01873 0.5kb upstream 0.5kb upstream 779 true scaffold_414: 736-1514 Eucalyptus grandis
Eucgr.L01873 0.5kb upstream 0.5kb upstream 500 false scaffold_414: 1015-1514 Eucalyptus grandis
Eucgr.L01873 0.5kb downstream 0.5kb downstream 779 true scaffold_414: 236-1014 Eucalyptus grandis
Eucgr.L01873 0.5kb downstream 0.5kb downstream 500 false scaffold_414: 236-735 Eucalyptus grandis
Eucgr.L01873 1.0kb upstream 1.0kb upstream 1279 true scaffold_414: 736-2014 Eucalyptus grandis
Eucgr.L01873 1.0kb upstream 1.0kb upstream 1000 false scaffold_414: 1015-2014 Eucalyptus grandis
Eucgr.L01873 1.0kb downstream 1.0kb downstream 1014 true scaffold_414: 1-1014 Eucalyptus grandis
Eucgr.L01873 1.0kb downstream 1.0kb downstream 735 false scaffold_414: 1-735 Eucalyptus grandis
Eucgr.L01873 2.0kb upstream 2.0kb upstream 2279 true scaffold_414: 736-3014 Eucalyptus grandis
Eucgr.L01873 2.0kb upstream 2.0kb upstream 2000 false scaffold_414: 1015-3014 Eucalyptus grandis
Eucgr.L01873 2.0kb downstream 2.0kb downstream 1014 true scaffold_414: 1-1014 Eucalyptus grandis
Eucgr.L01873 2.0kb downstream 2.0kb downstream 735 false scaffold_414: 1-735 Eucalyptus grandis
Eucgr.L01873 5.0kb upstream 5.0kb upstream 5279 true scaffold_414: 736-6014 Eucalyptus grandis
Eucgr.L01873 5.0kb upstream 5.0kb upstream 5000 false scaffold_414: 1015-6014 Eucalyptus grandis
Eucgr.L01873 5.0kb downstream 5.0kb downstream 1014 true scaffold_414: 1-1014 Eucalyptus grandis
Eucgr.L01873 5.0kb downstream 5.0kb downstream 735 false scaffold_414: 1-735 Eucalyptus grandis
Eucgr.L01873 10.0kb upstream 10.0kb upstream 10279 true scaffold_414: 736-11014 Eucalyptus grandis
Eucgr.L01873 10.0kb upstream 10.0kb upstream 10000 false scaffold_414: 1015-11014 Eucalyptus grandis
Eucgr.L01873 10.0kb downstream 10.0kb downstream 1014 true scaffold_414: 1-1014 Eucalyptus grandis
Eucgr.L01873 10.0kb downstream 10.0kb downstream 735 false scaffold_414: 1-735 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063732 5270 Rosid View MSA
123750891 5271 Pentapetalae View MSA
122796702 5272 Eudicot View MSA
122044358 5273 Angiosperm View MSA
123429171 5275 Viridiplantae View MSA
121351184 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.248822 0.0 2.35581 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.119831 0.0 1.66169 Low Low
cufflinks 0.805683 0.0 4.7945    
cufflinks 2.49401 0.0 9.47277    
cufflinks 2.25707 0.0 9.50486    

0 Strain