Gene : Eucgr.L03490 E. grandis v2.0
Defline:  (1 of 2) PTHR31636:SF25 - SCARECROW-LIKE PROTEIN 26 Genomic Order:  1
Name:  ? Eucgr.L03490 Secondary Identifier:  ? PAC:32069861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L03490 0.5kb upstream 0.5kb upstream 2230 true scaffold_3358: 978-3207 Eucalyptus grandis
Eucgr.L03490 0.5kb upstream 0.5kb upstream 500 false scaffold_3358: 2708-3207 Eucalyptus grandis
Eucgr.L03490 0.5kb downstream 0.5kb downstream 2230 true scaffold_3358: 478-2707 Eucalyptus grandis
Eucgr.L03490 0.5kb downstream 0.5kb downstream 500 false scaffold_3358: 478-977 Eucalyptus grandis
Eucgr.L03490 1.0kb upstream 1.0kb upstream 2730 true scaffold_3358: 978-3707 Eucalyptus grandis
Eucgr.L03490 1.0kb upstream 1.0kb upstream 1000 false scaffold_3358: 2708-3707 Eucalyptus grandis
Eucgr.L03490 1.0kb downstream 1.0kb downstream 2707 true scaffold_3358: 1-2707 Eucalyptus grandis
Eucgr.L03490 1.0kb downstream 1.0kb downstream 977 false scaffold_3358: 1-977 Eucalyptus grandis
Eucgr.L03490 2.0kb upstream 2.0kb upstream 3147 true scaffold_3358: 978-4124 Eucalyptus grandis
Eucgr.L03490 2.0kb upstream 2.0kb upstream 1417 false scaffold_3358: 2708-4124 Eucalyptus grandis
Eucgr.L03490 2.0kb downstream 2.0kb downstream 2707 true scaffold_3358: 1-2707 Eucalyptus grandis
Eucgr.L03490 2.0kb downstream 2.0kb downstream 977 false scaffold_3358: 1-977 Eucalyptus grandis
Eucgr.L03490 5.0kb upstream 5.0kb upstream 3147 true scaffold_3358: 978-4124 Eucalyptus grandis
Eucgr.L03490 5.0kb upstream 5.0kb upstream 1417 false scaffold_3358: 2708-4124 Eucalyptus grandis
Eucgr.L03490 5.0kb downstream 5.0kb downstream 2707 true scaffold_3358: 1-2707 Eucalyptus grandis
Eucgr.L03490 5.0kb downstream 5.0kb downstream 977 false scaffold_3358: 1-977 Eucalyptus grandis
Eucgr.L03490 10.0kb upstream 10.0kb upstream 3147 true scaffold_3358: 978-4124 Eucalyptus grandis
Eucgr.L03490 10.0kb upstream 10.0kb upstream 1417 false scaffold_3358: 2708-4124 Eucalyptus grandis
Eucgr.L03490 10.0kb downstream 10.0kb downstream 2707 true scaffold_3358: 1-2707 Eucalyptus grandis
Eucgr.L03490 10.0kb downstream 10.0kb downstream 977 false scaffold_3358: 1-977 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066104 5270 Rosid View MSA
123741330 5271 Pentapetalae View MSA
122785836 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0770495 0.0 0.348907 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.147523 0.0 0.555828 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain