Gene : Eucgr.L00615 E. grandis v2.0
Defline:  (1 of 13) PTHR11177//PTHR11177:SF208 - CHITINASE Genomic Order:  3
Name:  ? Eucgr.L00615 Secondary Identifier:  ? PAC:32027951
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00615 0.5kb upstream 0.5kb upstream 2203 true scaffold_32: 37139-39341 Eucalyptus grandis
Eucgr.L00615 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 38842-39341 Eucalyptus grandis
Eucgr.L00615 0.5kb downstream 0.5kb downstream 2203 true scaffold_32: 36639-38841 Eucalyptus grandis
Eucgr.L00615 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 36639-37138 Eucalyptus grandis
Eucgr.L00615 1.0kb upstream 1.0kb upstream 2703 true scaffold_32: 37139-39841 Eucalyptus grandis
Eucgr.L00615 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 38842-39841 Eucalyptus grandis
Eucgr.L00615 1.0kb downstream 1.0kb downstream 2703 true scaffold_32: 36139-38841 Eucalyptus grandis
Eucgr.L00615 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 36139-37138 Eucalyptus grandis
Eucgr.L00615 2.0kb upstream 2.0kb upstream 3703 true scaffold_32: 37139-40841 Eucalyptus grandis
Eucgr.L00615 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 38842-40841 Eucalyptus grandis
Eucgr.L00615 2.0kb downstream 2.0kb downstream 3703 true scaffold_32: 35139-38841 Eucalyptus grandis
Eucgr.L00615 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 35139-37138 Eucalyptus grandis
Eucgr.L00615 5.0kb upstream 5.0kb upstream 6703 true scaffold_32: 37139-43841 Eucalyptus grandis
Eucgr.L00615 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 38842-43841 Eucalyptus grandis
Eucgr.L00615 5.0kb downstream 5.0kb downstream 6703 true scaffold_32: 32139-38841 Eucalyptus grandis
Eucgr.L00615 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 32139-37138 Eucalyptus grandis
Eucgr.L00615 10.0kb upstream 10.0kb upstream 11703 true scaffold_32: 37139-48841 Eucalyptus grandis
Eucgr.L00615 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 38842-48841 Eucalyptus grandis
Eucgr.L00615 10.0kb downstream 10.0kb downstream 11703 true scaffold_32: 27139-38841 Eucalyptus grandis
Eucgr.L00615 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 27139-37138 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073719 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00838344 0.0 0.101851 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0300691 0.0 0.210169 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain