Gene : Eucgr.L01689 E. grandis v2.0
Defline:  (1 of 16) PF05911 - Plant protein of unknown function (DUF869) Genomic Order:  1
Name:  ? Eucgr.L01689 Secondary Identifier:  ? PAC:32027798
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L01689 0.5kb upstream 0.5kb upstream 2240 true scaffold_308: 19301-21540 Eucalyptus grandis
Eucgr.L01689 0.5kb upstream 0.5kb upstream 500 false scaffold_308: 21041-21540 Eucalyptus grandis
Eucgr.L01689 0.5kb downstream 0.5kb downstream 2240 true scaffold_308: 18801-21040 Eucalyptus grandis
Eucgr.L01689 0.5kb downstream 0.5kb downstream 500 false scaffold_308: 18801-19300 Eucalyptus grandis
Eucgr.L01689 1.0kb upstream 1.0kb upstream 2740 true scaffold_308: 19301-22040 Eucalyptus grandis
Eucgr.L01689 1.0kb upstream 1.0kb upstream 1000 false scaffold_308: 21041-22040 Eucalyptus grandis
Eucgr.L01689 1.0kb downstream 1.0kb downstream 2740 true scaffold_308: 18301-21040 Eucalyptus grandis
Eucgr.L01689 1.0kb downstream 1.0kb downstream 1000 false scaffold_308: 18301-19300 Eucalyptus grandis
Eucgr.L01689 2.0kb upstream 2.0kb upstream 3740 true scaffold_308: 19301-23040 Eucalyptus grandis
Eucgr.L01689 2.0kb upstream 2.0kb upstream 2000 false scaffold_308: 21041-23040 Eucalyptus grandis
Eucgr.L01689 2.0kb downstream 2.0kb downstream 3740 true scaffold_308: 17301-21040 Eucalyptus grandis
Eucgr.L01689 2.0kb downstream 2.0kb downstream 2000 false scaffold_308: 17301-19300 Eucalyptus grandis
Eucgr.L01689 5.0kb upstream 5.0kb upstream 6740 true scaffold_308: 19301-26040 Eucalyptus grandis
Eucgr.L01689 5.0kb upstream 5.0kb upstream 5000 false scaffold_308: 21041-26040 Eucalyptus grandis
Eucgr.L01689 5.0kb downstream 5.0kb downstream 6740 true scaffold_308: 14301-21040 Eucalyptus grandis
Eucgr.L01689 5.0kb downstream 5.0kb downstream 5000 false scaffold_308: 14301-19300 Eucalyptus grandis
Eucgr.L01689 10.0kb upstream 10.0kb upstream 11740 true scaffold_308: 19301-31040 Eucalyptus grandis
Eucgr.L01689 10.0kb upstream 10.0kb upstream 10000 false scaffold_308: 21041-31040 Eucalyptus grandis
Eucgr.L01689 10.0kb downstream 10.0kb downstream 11740 true scaffold_308: 9301-21040 Eucalyptus grandis
Eucgr.L01689 10.0kb downstream 10.0kb downstream 10000 false scaffold_308: 9301-19300 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066904 5270 Rosid View MSA
123739250 5271 Pentapetalae View MSA
122788095 5272 Eudicot View MSA
122042789 5273 Angiosperm View MSA
121345472 5274 Embryophyte View MSA
123380224 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.80817 0.0 5.62529    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.75966 0.0 5.48721    
cufflinks 2.46197 0.0 7.34973    
cufflinks 3.64351 0.0 10.4171   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain