Gene : Eucgr.L02509 E. grandis v2.0
Defline:  (1 of 15) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  1
Name:  ? Eucgr.L02509 Secondary Identifier:  ? PAC:32027915
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02509 0.5kb upstream 0.5kb upstream 731 true scaffold_972: 543-1273 Eucalyptus grandis
Eucgr.L02509 0.5kb upstream 0.5kb upstream 500 false scaffold_972: 543-1042 Eucalyptus grandis
Eucgr.L02509 0.5kb downstream 0.5kb downstream 731 true scaffold_972: 1043-1773 Eucalyptus grandis
Eucgr.L02509 0.5kb downstream 0.5kb downstream 500 false scaffold_972: 1274-1773 Eucalyptus grandis
Eucgr.L02509 1.0kb upstream 1.0kb upstream 1231 true scaffold_972: 43-1273 Eucalyptus grandis
Eucgr.L02509 1.0kb upstream 1.0kb upstream 1000 false scaffold_972: 43-1042 Eucalyptus grandis
Eucgr.L02509 1.0kb downstream 1.0kb downstream 1231 true scaffold_972: 1043-2273 Eucalyptus grandis
Eucgr.L02509 1.0kb downstream 1.0kb downstream 1000 false scaffold_972: 1274-2273 Eucalyptus grandis
Eucgr.L02509 2.0kb upstream 2.0kb upstream 1273 true scaffold_972: 1-1273 Eucalyptus grandis
Eucgr.L02509 2.0kb upstream 2.0kb upstream 1042 false scaffold_972: 1-1042 Eucalyptus grandis
Eucgr.L02509 2.0kb downstream 2.0kb downstream 2231 true scaffold_972: 1043-3273 Eucalyptus grandis
Eucgr.L02509 2.0kb downstream 2.0kb downstream 2000 false scaffold_972: 1274-3273 Eucalyptus grandis
Eucgr.L02509 5.0kb upstream 5.0kb upstream 1273 true scaffold_972: 1-1273 Eucalyptus grandis
Eucgr.L02509 5.0kb upstream 5.0kb upstream 1042 false scaffold_972: 1-1042 Eucalyptus grandis
Eucgr.L02509 5.0kb downstream 5.0kb downstream 5231 true scaffold_972: 1043-6273 Eucalyptus grandis
Eucgr.L02509 5.0kb downstream 5.0kb downstream 5000 false scaffold_972: 1274-6273 Eucalyptus grandis
Eucgr.L02509 10.0kb upstream 10.0kb upstream 1273 true scaffold_972: 1-1273 Eucalyptus grandis
Eucgr.L02509 10.0kb upstream 10.0kb upstream 1042 false scaffold_972: 1-1042 Eucalyptus grandis
Eucgr.L02509 10.0kb downstream 10.0kb downstream 10231 true scaffold_972: 1043-11273 Eucalyptus grandis
Eucgr.L02509 10.0kb downstream 10.0kb downstream 10000 false scaffold_972: 1274-11273 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051039 5270 Rosid View MSA
123752736 5271 Pentapetalae View MSA
122795742 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.28681 0.0 12.2902    
cufflinks 74.8744 0.0 190.105 High High
cufflinks 4.37026 0.0 16.3821    
cufflinks 3.81561 0.0 14.3762    
cufflinks 6.54608 0.0 22.1609    
cufflinks 15.4967 0.0 49.8383    

0 Strain