Gene : Eucgr.L00936 E. grandis v2.0
Defline:  (1 of 3) PTHR11206:SF149 - MATE EFFLUX FAMILY PROTEIN 3, CHLOROPLASTIC Genomic Order:  2
Name:  ? Eucgr.L00936 Secondary Identifier:  ? PAC:32049356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L00936 0.5kb upstream 0.5kb upstream 5690 true scaffold_74: 7633-13322 Eucalyptus grandis
Eucgr.L00936 0.5kb upstream 0.5kb upstream 500 false scaffold_74: 12823-13322 Eucalyptus grandis
Eucgr.L00936 0.5kb downstream 0.5kb downstream 5690 true scaffold_74: 7133-12822 Eucalyptus grandis
Eucgr.L00936 0.5kb downstream 0.5kb downstream 500 false scaffold_74: 7133-7632 Eucalyptus grandis
Eucgr.L00936 1.0kb upstream 1.0kb upstream 6190 true scaffold_74: 7633-13822 Eucalyptus grandis
Eucgr.L00936 1.0kb upstream 1.0kb upstream 1000 false scaffold_74: 12823-13822 Eucalyptus grandis
Eucgr.L00936 1.0kb downstream 1.0kb downstream 6190 true scaffold_74: 6633-12822 Eucalyptus grandis
Eucgr.L00936 1.0kb downstream 1.0kb downstream 1000 false scaffold_74: 6633-7632 Eucalyptus grandis
Eucgr.L00936 2.0kb upstream 2.0kb upstream 7190 true scaffold_74: 7633-14822 Eucalyptus grandis
Eucgr.L00936 2.0kb upstream 2.0kb upstream 2000 false scaffold_74: 12823-14822 Eucalyptus grandis
Eucgr.L00936 2.0kb downstream 2.0kb downstream 7190 true scaffold_74: 5633-12822 Eucalyptus grandis
Eucgr.L00936 2.0kb downstream 2.0kb downstream 2000 false scaffold_74: 5633-7632 Eucalyptus grandis
Eucgr.L00936 5.0kb upstream 5.0kb upstream 10190 true scaffold_74: 7633-17822 Eucalyptus grandis
Eucgr.L00936 5.0kb upstream 5.0kb upstream 5000 false scaffold_74: 12823-17822 Eucalyptus grandis
Eucgr.L00936 5.0kb downstream 5.0kb downstream 10190 true scaffold_74: 2633-12822 Eucalyptus grandis
Eucgr.L00936 5.0kb downstream 5.0kb downstream 5000 false scaffold_74: 2633-7632 Eucalyptus grandis
Eucgr.L00936 10.0kb upstream 10.0kb upstream 15190 true scaffold_74: 7633-22822 Eucalyptus grandis
Eucgr.L00936 10.0kb upstream 10.0kb upstream 10000 false scaffold_74: 12823-22822 Eucalyptus grandis
Eucgr.L00936 10.0kb downstream 10.0kb downstream 12822 true scaffold_74: 1-12822 Eucalyptus grandis
Eucgr.L00936 10.0kb downstream 10.0kb downstream 7632 false scaffold_74: 1-7632 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050870 5270 Rosid View MSA
123744854 5271 Pentapetalae View MSA
122788887 5272 Eudicot View MSA
122043189 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57821 0.0 12.3149    
cufflinks 11.0951 0.0 31.6831    
cufflinks 3.61254 0.0 9.35621    
cufflinks 4.42891 0.0 11.0955    
cufflinks 3.81162 0.0 9.78997    
cufflinks 23.9714 0.0 54.0184   High

0 Strain