Gene : Eucgr.L02202 E. grandis v2.0
Defline:  (1 of 26) PTHR31989:SF21 - NAC TRANSCRIPTION FACTOR-LIKE 9 Genomic Order:  2
Name:  ? Eucgr.L02202 Secondary Identifier:  ? PAC:32062327
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02202 0.5kb upstream 0.5kb upstream 2825 true scaffold_667: 13460-16284 Eucalyptus grandis
Eucgr.L02202 0.5kb upstream 0.5kb upstream 500 false scaffold_667: 15785-16284 Eucalyptus grandis
Eucgr.L02202 0.5kb downstream 0.5kb downstream 2825 true scaffold_667: 12960-15784 Eucalyptus grandis
Eucgr.L02202 0.5kb downstream 0.5kb downstream 500 false scaffold_667: 12960-13459 Eucalyptus grandis
Eucgr.L02202 1.0kb upstream 1.0kb upstream 3325 true scaffold_667: 13460-16784 Eucalyptus grandis
Eucgr.L02202 1.0kb upstream 1.0kb upstream 1000 false scaffold_667: 15785-16784 Eucalyptus grandis
Eucgr.L02202 1.0kb downstream 1.0kb downstream 3325 true scaffold_667: 12460-15784 Eucalyptus grandis
Eucgr.L02202 1.0kb downstream 1.0kb downstream 1000 false scaffold_667: 12460-13459 Eucalyptus grandis
Eucgr.L02202 2.0kb upstream 2.0kb upstream 4325 true scaffold_667: 13460-17784 Eucalyptus grandis
Eucgr.L02202 2.0kb upstream 2.0kb upstream 2000 false scaffold_667: 15785-17784 Eucalyptus grandis
Eucgr.L02202 2.0kb downstream 2.0kb downstream 4325 true scaffold_667: 11460-15784 Eucalyptus grandis
Eucgr.L02202 2.0kb downstream 2.0kb downstream 2000 false scaffold_667: 11460-13459 Eucalyptus grandis
Eucgr.L02202 5.0kb upstream 5.0kb upstream 7325 true scaffold_667: 13460-20784 Eucalyptus grandis
Eucgr.L02202 5.0kb upstream 5.0kb upstream 5000 false scaffold_667: 15785-20784 Eucalyptus grandis
Eucgr.L02202 5.0kb downstream 5.0kb downstream 7325 true scaffold_667: 8460-15784 Eucalyptus grandis
Eucgr.L02202 5.0kb downstream 5.0kb downstream 5000 false scaffold_667: 8460-13459 Eucalyptus grandis
Eucgr.L02202 10.0kb upstream 10.0kb upstream 8643 true scaffold_667: 13460-22102 Eucalyptus grandis
Eucgr.L02202 10.0kb upstream 10.0kb upstream 6318 false scaffold_667: 15785-22102 Eucalyptus grandis
Eucgr.L02202 10.0kb downstream 10.0kb downstream 12325 true scaffold_667: 3460-15784 Eucalyptus grandis
Eucgr.L02202 10.0kb downstream 10.0kb downstream 10000 false scaffold_667: 3460-13459 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075813 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.19429 0.0 17.2078    
cufflinks 10.521 0.0 24.2593    
cufflinks 11.3083 0.0 26.0003    
cufflinks 14.663 0.0 33.1187    
cufflinks 58.1702 0.0 129.865 High High
cufflinks 1.61242 0.0 4.48954   Low

0 Strain