Gene : Eucgr.L02186 E. grandis v2.0
Defline:  (1 of 1) PF02502//PF07883 - Ribose/Galactose Isomerase (LacAB_rpiB) // Cupin domain (Cupin_2) Genomic Order:  1
Name:  ? Eucgr.L02186 Secondary Identifier:  ? PAC:32062500
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CALVIN-PWY Eucalyptus grandis pathologic  
Egrandis NONOXIPENT-PWY Eucalyptus grandis pathologic  
Egrandis PENTOSE-P-PWY Eucalyptus grandis pathologic  
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.L02186 0.5kb upstream 0.5kb upstream 1344 true scaffold_651: 1-1344 Eucalyptus grandis
Eucgr.L02186 0.5kb upstream 0.5kb upstream 288 false scaffold_651: 1-288 Eucalyptus grandis
Eucgr.L02186 0.5kb downstream 0.5kb downstream 1556 true scaffold_651: 289-1844 Eucalyptus grandis
Eucgr.L02186 0.5kb downstream 0.5kb downstream 500 false scaffold_651: 1345-1844 Eucalyptus grandis
Eucgr.L02186 1.0kb upstream 1.0kb upstream 1344 true scaffold_651: 1-1344 Eucalyptus grandis
Eucgr.L02186 1.0kb upstream 1.0kb upstream 288 false scaffold_651: 1-288 Eucalyptus grandis
Eucgr.L02186 1.0kb downstream 1.0kb downstream 2056 true scaffold_651: 289-2344 Eucalyptus grandis
Eucgr.L02186 1.0kb downstream 1.0kb downstream 1000 false scaffold_651: 1345-2344 Eucalyptus grandis
Eucgr.L02186 2.0kb upstream 2.0kb upstream 1344 true scaffold_651: 1-1344 Eucalyptus grandis
Eucgr.L02186 2.0kb upstream 2.0kb upstream 288 false scaffold_651: 1-288 Eucalyptus grandis
Eucgr.L02186 2.0kb downstream 2.0kb downstream 3056 true scaffold_651: 289-3344 Eucalyptus grandis
Eucgr.L02186 2.0kb downstream 2.0kb downstream 2000 false scaffold_651: 1345-3344 Eucalyptus grandis
Eucgr.L02186 5.0kb upstream 5.0kb upstream 1344 true scaffold_651: 1-1344 Eucalyptus grandis
Eucgr.L02186 5.0kb upstream 5.0kb upstream 288 false scaffold_651: 1-288 Eucalyptus grandis
Eucgr.L02186 5.0kb downstream 5.0kb downstream 6056 true scaffold_651: 289-6344 Eucalyptus grandis
Eucgr.L02186 5.0kb downstream 5.0kb downstream 5000 false scaffold_651: 1345-6344 Eucalyptus grandis
Eucgr.L02186 10.0kb upstream 10.0kb upstream 1344 true scaffold_651: 1-1344 Eucalyptus grandis
Eucgr.L02186 10.0kb upstream 10.0kb upstream 288 false scaffold_651: 1-288 Eucalyptus grandis
Eucgr.L02186 10.0kb downstream 10.0kb downstream 11056 true scaffold_651: 289-11344 Eucalyptus grandis
Eucgr.L02186 10.0kb downstream 10.0kb downstream 10000 false scaffold_651: 1345-11344 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781818 5273 Angiosperm View MSA
124051931 5270 Rosid View MSA
123750676 5271 Pentapetalae View MSA
122773793 5272 Eudicot View MSA
121053380 5274 Embryophyte View MSA
123093403 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain