Protein Domain : IPR019576

Type:  Domain Name:  Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
Description:  Pyridoxamine 5'-phosphate oxidase () is an enzyme that is involved in the de novo synthesis of pyridoxine (vitamin B6) and pyridoxal phosphate. It oxidizes pyridoxamine-5-P (PMP) and pyridoxine-5-P (PNP) to pyridoxal-5-P. The enzyme requires the presence of flavin mononucleotide (FMN) as a cofactor, although there is some evidence that coenzyme F420 may perform this role in some species [].The sequences of the enzyme from bacterial (genes pdxH or fprA) [] andfungal (gene PDX3) [] sources show that this protein has been highly conserved throughout evolution. PdxH is evolutionary related [] to one of the enzymes in the phenazine biosynthesis protein pathway, phzD (also known as phzG).This entry represents one of the two dimerisation regions of the protein, located at the edge of the dimer interface, at the C terminus, being the last three beta strands, S6, S7, and S8 along with the last three residues to the end. In , S6 runs from residues 178-192, S7 from 200-206 and S8 from 211-215. the extended loop, of residues 167-177 may well be involved in the pocket formed between the two dimers that positions the FMN molecule []. Short Name:  Pyridoxamine_oxidase_dimer_C

0 Child Features

1 Contains

DB identifier Type Name
IPR019740 Conserved_site Pyridoxamine 5'-phosphate oxidase, conserved site

1 Cross References

Identifier
PF10590

3 Found Ins

DB identifier Type Name
IPR012349 Domain FMN-binding split barrel
IPR000659 Family Pyridoxamine 5'-phosphate oxidase
IPR021198 Family Pyridoxamine 5'-phosphate oxidase, plant

2 GO Annotations

GO Term Gene Name
GO:0016638 IPR019576
GO:0055114 IPR019576

2 Ontology Annotations

GO Term Gene Name
GO:0016638 IPR019576
GO:0055114 IPR019576

0 Parent Features

507 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
81184 D8R082 PAC:15406031 Selaginella moellendorffii 447  
evm.model.supercontig_36.204 PAC:16418398 Carica papaya 461  
29908.m006117 B9RJT5 PAC:16812937 Ricinus communis 546  
Cucsa.311770.1 A0A0A0LEN5 PAC:16976749 Cucumis sativus 530  
AT5G49970.1 Q9LTX3 PAC:19671695 Arabidopsis thaliana 530  
Thhalv10013217m V4LIW1 PAC:20204053 Eutrema salsugineum 533  
Ciclev10000790m V4V581 PAC:20785508 Citrus clementina 540  
Ciclev10001061m V4TBY4 PAC:20785510 Citrus clementina 467  
Ciclev10001064m V4TBY4 PAC:20785511 Citrus clementina 467  
Ciclev10001057m V4TBY8 PAC:20788875 Citrus clementina 467  
Lus10002098 PAC:23151643 Linum usitatissimum 1176  
Lus10000833 PAC:23170689 Linum usitatissimum 961  
Potri.002G102600.2 A0A2K2BGL8 PAC:27024120 Populus trichocarpa 542  
Potri.002G102600.1 A0A2K2BGL8 PAC:27024119 Populus trichocarpa 542  
Potri.002G102600.3 PAC:27024122 Populus trichocarpa 453  
Potri.002G102600.4 A0A2K2BGL8 PAC:27024121 Populus trichocarpa 542  
Potri.005G159500.1 PAC:27028758 Populus trichocarpa 132  
Gorai.009G279800.1 A0A0D2QPC6 PAC:26766264 Gossypium raimondii 536  
29912 I0YUC1 PAC:27391969 Coccomyxa subellipsoidea C-169 465  
Thecc1EG034462t3 A0A061FDH4 PAC:27457064 Theobroma cacao 468  
Thecc1EG034462t4 A0A061FDH4 PAC:27457065 Theobroma cacao 468  
Thecc1EG034462t6 A0A061FEN8 PAC:27457062 Theobroma cacao 537  
Thecc1EG034462t7 A0A061FLK0 PAC:27457063 Theobroma cacao 486  
Thecc1EG034462t2 A0A061FLJ6 PAC:27457066 Theobroma cacao 461  
Thecc1EG034462t8 A0A061FLJ6 PAC:27457067 Theobroma cacao 461  
Thecc1EG034462t1 A0A061FEN4 PAC:27457061 Theobroma cacao 555  
Migut.I00061.1.p A0A022RR29 PAC:28930914 Mimulus guttatus 540  
Migut.I00062.1.p A0A022RRZ9 PAC:28931071 Mimulus guttatus 447  
Araha.7363s0010.1.p PAC:28844105 Arabidopsis halleri 447  
Cagra.2776s0021.1.p PAC:28909973 Capsella grandiflora 537  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            8586283
            1356963
            7896706
            20675471
            10903950