Gene : GSMUA_Achr3G27980_001 M. acuminata v1
Defline:  (1 of 1) PTHR11405:SF16 - ASPARTATE CARBAMOYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  2797
Name:  ? GSMUA_Achr3G27980_001 Secondary Identifier:  ? PAC:32293892
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PWY0-162 Musa acuminata pathologic  
Macuminata PWY-5686 Musa acuminata pathologic  
Macuminata PWY-7211 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr3G27980_001 0.5kb upstream 0.5kb upstream 4673 true chr3: 27384364-27389036 Musa acuminata
GSMUA_Achr3G27980_001 0.5kb upstream 0.5kb upstream 500 false chr3: 27388537-27389036 Musa acuminata
GSMUA_Achr3G27980_001 0.5kb downstream 0.5kb downstream 4673 true chr3: 27383864-27388536 Musa acuminata
GSMUA_Achr3G27980_001 0.5kb downstream 0.5kb downstream 500 false chr3: 27383864-27384363 Musa acuminata
GSMUA_Achr3G27980_001 1.0kb upstream 1.0kb upstream 5173 true chr3: 27384364-27389536 Musa acuminata
GSMUA_Achr3G27980_001 1.0kb upstream 1.0kb upstream 1000 false chr3: 27388537-27389536 Musa acuminata
GSMUA_Achr3G27980_001 1.0kb downstream 1.0kb downstream 5173 true chr3: 27383364-27388536 Musa acuminata
GSMUA_Achr3G27980_001 1.0kb downstream 1.0kb downstream 1000 false chr3: 27383364-27384363 Musa acuminata
GSMUA_Achr3G27980_001 2.0kb upstream 2.0kb upstream 6173 true chr3: 27384364-27390536 Musa acuminata
GSMUA_Achr3G27980_001 2.0kb upstream 2.0kb upstream 2000 false chr3: 27388537-27390536 Musa acuminata
GSMUA_Achr3G27980_001 2.0kb downstream 2.0kb downstream 6173 true chr3: 27382364-27388536 Musa acuminata
GSMUA_Achr3G27980_001 2.0kb downstream 2.0kb downstream 2000 false chr3: 27382364-27384363 Musa acuminata
GSMUA_Achr3G27980_001 5.0kb upstream 5.0kb upstream 9173 true chr3: 27384364-27393536 Musa acuminata
GSMUA_Achr3G27980_001 5.0kb upstream 5.0kb upstream 5000 false chr3: 27388537-27393536 Musa acuminata
GSMUA_Achr3G27980_001 5.0kb downstream 5.0kb downstream 9173 true chr3: 27379364-27388536 Musa acuminata
GSMUA_Achr3G27980_001 5.0kb downstream 5.0kb downstream 5000 false chr3: 27379364-27384363 Musa acuminata
GSMUA_Achr3G27980_001 10.0kb upstream 10.0kb upstream 14173 true chr3: 27384364-27398536 Musa acuminata
GSMUA_Achr3G27980_001 10.0kb upstream 10.0kb upstream 10000 false chr3: 27388537-27398536 Musa acuminata
GSMUA_Achr3G27980_001 10.0kb downstream 10.0kb downstream 14173 true chr3: 27374364-27388536 Musa acuminata
GSMUA_Achr3G27980_001 10.0kb downstream 10.0kb downstream 10000 false chr3: 27374364-27384363 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain