Gene : GSMUA_Achr3G30760_001 M. acuminata v1
Defline:  (1 of 1) PTHR11680//PTHR11680:SF8 - SERINE HYDROXYMETHYLTRANSFERASE Genomic Order:  3074
Name:  ? GSMUA_Achr3G30760_001 Secondary Identifier:  ? PAC:32293094
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata GLYSYN-PWY Musa acuminata pathologic  
Macuminata PWY-2161 Musa acuminata pathologic  
Macuminata PWY-3841 Musa acuminata pathologic  
Macuminata SER-GLYSYN-PWY Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr3G30760_001 0.5kb upstream 0.5kb upstream 6168 true chr3: 29371519-29377686 Musa acuminata
GSMUA_Achr3G30760_001 0.5kb upstream 0.5kb upstream 500 false chr3: 29377187-29377686 Musa acuminata
GSMUA_Achr3G30760_001 0.5kb downstream 0.5kb downstream 6168 true chr3: 29371019-29377186 Musa acuminata
GSMUA_Achr3G30760_001 0.5kb downstream 0.5kb downstream 500 false chr3: 29371019-29371518 Musa acuminata
GSMUA_Achr3G30760_001 1.0kb upstream 1.0kb upstream 6668 true chr3: 29371519-29378186 Musa acuminata
GSMUA_Achr3G30760_001 1.0kb upstream 1.0kb upstream 1000 false chr3: 29377187-29378186 Musa acuminata
GSMUA_Achr3G30760_001 1.0kb downstream 1.0kb downstream 6668 true chr3: 29370519-29377186 Musa acuminata
GSMUA_Achr3G30760_001 1.0kb downstream 1.0kb downstream 1000 false chr3: 29370519-29371518 Musa acuminata
GSMUA_Achr3G30760_001 2.0kb upstream 2.0kb upstream 7668 true chr3: 29371519-29379186 Musa acuminata
GSMUA_Achr3G30760_001 2.0kb upstream 2.0kb upstream 2000 false chr3: 29377187-29379186 Musa acuminata
GSMUA_Achr3G30760_001 2.0kb downstream 2.0kb downstream 7668 true chr3: 29369519-29377186 Musa acuminata
GSMUA_Achr3G30760_001 2.0kb downstream 2.0kb downstream 2000 false chr3: 29369519-29371518 Musa acuminata
GSMUA_Achr3G30760_001 5.0kb upstream 5.0kb upstream 10668 true chr3: 29371519-29382186 Musa acuminata
GSMUA_Achr3G30760_001 5.0kb upstream 5.0kb upstream 5000 false chr3: 29377187-29382186 Musa acuminata
GSMUA_Achr3G30760_001 5.0kb downstream 5.0kb downstream 10668 true chr3: 29366519-29377186 Musa acuminata
GSMUA_Achr3G30760_001 5.0kb downstream 5.0kb downstream 5000 false chr3: 29366519-29371518 Musa acuminata
GSMUA_Achr3G30760_001 10.0kb upstream 10.0kb upstream 15668 true chr3: 29371519-29387186 Musa acuminata
GSMUA_Achr3G30760_001 10.0kb upstream 10.0kb upstream 10000 false chr3: 29377187-29387186 Musa acuminata
GSMUA_Achr3G30760_001 10.0kb downstream 10.0kb downstream 15668 true chr3: 29361519-29377186 Musa acuminata
GSMUA_Achr3G30760_001 10.0kb downstream 10.0kb downstream 10000 false chr3: 29361519-29371518 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain