Gene : GSMUA_Achr4G12320_001 M. acuminata v1

Defline:  (1 of 6) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  1231
Name:  ? GSMUA_Achr4G12320_001 Secondary Identifier:  ? PAC:32297939

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PWY-3561 Musa acuminata pathologic  
Macuminata PWY3O-450 Musa acuminata pathologic  
Macuminata PWY4FS-2 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr4G12320_001 0.5kb upstream 0.5kb upstream 5070 true chr4: 9103394-9108463 Musa acuminata
GSMUA_Achr4G12320_001 0.5kb upstream 0.5kb upstream 500 false chr4: 9107964-9108463 Musa acuminata
GSMUA_Achr4G12320_001 0.5kb downstream 0.5kb downstream 5070 true chr4: 9102894-9107963 Musa acuminata
GSMUA_Achr4G12320_001 0.5kb downstream 0.5kb downstream 500 false chr4: 9102894-9103393 Musa acuminata
GSMUA_Achr4G12320_001 1.0kb upstream 1.0kb upstream 5570 true chr4: 9103394-9108963 Musa acuminata
GSMUA_Achr4G12320_001 1.0kb upstream 1.0kb upstream 1000 false chr4: 9107964-9108963 Musa acuminata
GSMUA_Achr4G12320_001 1.0kb downstream 1.0kb downstream 5570 true chr4: 9102394-9107963 Musa acuminata
GSMUA_Achr4G12320_001 1.0kb downstream 1.0kb downstream 1000 false chr4: 9102394-9103393 Musa acuminata
GSMUA_Achr4G12320_001 2.0kb upstream 2.0kb upstream 6570 true chr4: 9103394-9109963 Musa acuminata
GSMUA_Achr4G12320_001 2.0kb upstream 2.0kb upstream 2000 false chr4: 9107964-9109963 Musa acuminata
GSMUA_Achr4G12320_001 2.0kb downstream 2.0kb downstream 6570 true chr4: 9101394-9107963 Musa acuminata
GSMUA_Achr4G12320_001 2.0kb downstream 2.0kb downstream 2000 false chr4: 9101394-9103393 Musa acuminata
GSMUA_Achr4G12320_001 5.0kb upstream 5.0kb upstream 9570 true chr4: 9103394-9112963 Musa acuminata
GSMUA_Achr4G12320_001 5.0kb upstream 5.0kb upstream 5000 false chr4: 9107964-9112963 Musa acuminata
GSMUA_Achr4G12320_001 5.0kb downstream 5.0kb downstream 9570 true chr4: 9098394-9107963 Musa acuminata
GSMUA_Achr4G12320_001 5.0kb downstream 5.0kb downstream 5000 false chr4: 9098394-9103393 Musa acuminata
GSMUA_Achr4G12320_001 10.0kb upstream 10.0kb upstream 14570 true chr4: 9103394-9117963 Musa acuminata
GSMUA_Achr4G12320_001 10.0kb upstream 10.0kb upstream 10000 false chr4: 9107964-9117963 Musa acuminata
GSMUA_Achr4G12320_001 10.0kb downstream 10.0kb downstream 14570 true chr4: 9093394-9107963 Musa acuminata
GSMUA_Achr4G12320_001 10.0kb downstream 10.0kb downstream 10000 false chr4: 9093394-9103393 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain