Gene : GSMUA_Achr6G16070_001 M. acuminata v1
Defline:  (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Genomic Order:  1606
Name:  ? GSMUA_Achr6G16070_001 Secondary Identifier:  ? PAC:32318264
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata PWY-7511 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr6G16070_001 0.5kb upstream 0.5kb upstream 1274 true chr6: 10726397-10727670 Musa acuminata
GSMUA_Achr6G16070_001 0.5kb upstream 0.5kb upstream 500 false chr6: 10727171-10727670 Musa acuminata
GSMUA_Achr6G16070_001 0.5kb downstream 0.5kb downstream 1274 true chr6: 10725897-10727170 Musa acuminata
GSMUA_Achr6G16070_001 0.5kb downstream 0.5kb downstream 500 false chr6: 10725897-10726396 Musa acuminata
GSMUA_Achr6G16070_001 1.0kb upstream 1.0kb upstream 1774 true chr6: 10726397-10728170 Musa acuminata
GSMUA_Achr6G16070_001 1.0kb upstream 1.0kb upstream 1000 false chr6: 10727171-10728170 Musa acuminata
GSMUA_Achr6G16070_001 1.0kb downstream 1.0kb downstream 1774 true chr6: 10725397-10727170 Musa acuminata
GSMUA_Achr6G16070_001 1.0kb downstream 1.0kb downstream 1000 false chr6: 10725397-10726396 Musa acuminata
GSMUA_Achr6G16070_001 2.0kb upstream 2.0kb upstream 2774 true chr6: 10726397-10729170 Musa acuminata
GSMUA_Achr6G16070_001 2.0kb upstream 2.0kb upstream 2000 false chr6: 10727171-10729170 Musa acuminata
GSMUA_Achr6G16070_001 2.0kb downstream 2.0kb downstream 2774 true chr6: 10724397-10727170 Musa acuminata
GSMUA_Achr6G16070_001 2.0kb downstream 2.0kb downstream 2000 false chr6: 10724397-10726396 Musa acuminata
GSMUA_Achr6G16070_001 5.0kb upstream 5.0kb upstream 5774 true chr6: 10726397-10732170 Musa acuminata
GSMUA_Achr6G16070_001 5.0kb upstream 5.0kb upstream 5000 false chr6: 10727171-10732170 Musa acuminata
GSMUA_Achr6G16070_001 5.0kb downstream 5.0kb downstream 5774 true chr6: 10721397-10727170 Musa acuminata
GSMUA_Achr6G16070_001 5.0kb downstream 5.0kb downstream 5000 false chr6: 10721397-10726396 Musa acuminata
GSMUA_Achr6G16070_001 10.0kb upstream 10.0kb upstream 10774 true chr6: 10726397-10737170 Musa acuminata
GSMUA_Achr6G16070_001 10.0kb upstream 10.0kb upstream 10000 false chr6: 10727171-10737170 Musa acuminata
GSMUA_Achr6G16070_001 10.0kb downstream 10.0kb downstream 10774 true chr6: 10716397-10727170 Musa acuminata
GSMUA_Achr6G16070_001 10.0kb downstream 10.0kb downstream 10000 false chr6: 10716397-10726396 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041904 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121309901 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain