Protein Family : RING/U-box superfamily protein 122041904

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  66

66 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29805.t000047 (1 of 1) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 R. communis v0.1 1076   29805: 244862-245937
Cucsa.307420 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 C. sativus v1.0 860   scaffold02977: 560556-561415
orange1.1g023542m.g (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 C. sinensis v1.1 1244   scaffold00303: 73560-74803
AT5G02750 (1 of 2) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 A. thaliana TAIR10 1086   Chr5: 620094-621179
Thhalv10014308m.g (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 E. salsugineum v1.0 1120   scaffold_2: 619568-620687
Ciclev10012410m.g (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 C. clementina v1.0 1232   scaffold_6: 12270372-12271603
Lus10003992.g (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 L. usitatissimum v1.0 879   scaffold437: 165369-166247
Lus10015046.g (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 L. usitatissimum v1.0 921   scaffold54: 137924-138844
Gorai.009G421800 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 G. raimondii v2.1 837   Chr09: 65894930-65895766
Thecc1EG022053 (1 of 1) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 T. cacao v1.1 1250   scaffold_5: 2389234-2390483
Migut.L01646 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 M. guttatus v2.0 1254   scaffold_12: 24746859-24748112
Araha.8306s0010 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 A. halleri v1.1 1064   Scaffold8306: 32151-33214
Cagra.2240s0032 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 C. grandiflora v1.1 855   Scaffold2240: 112421-113275
Glyma.10G047200 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 G. max Wm82.a2.v1 1455   Chr10: 4232120-4233574
Glyma.13G135100 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 G. max Wm82.a2.v1 1698   Chr13: 24744740-24746437
Brara.B00060 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 B. rapa FPsc v1.3 1156   A02: 348814-349969
Brara.J02859 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 B. rapa FPsc v1.3 1159   A10: 19535114-19536272
Bostr.2128s0156 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 B. stricta v1.2 998   Scaffold2128: 701704-702701
Medtr1g067260 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 M. truncatula Mt4.0v1 2707   chr1: 28975486-28978192
SapurV1A.0057s0490 (1 of 2) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 S. purpurea v1.0 834   chr06: 21119900-21120733
SapurV1A.0964s0080 (1 of 2) PTHR22763//PTHR22763:SF20 - RING ZINC FINGER PROTEIN // E3 LIGASE SHOOT GRAVITROPISM 9 S. purpurea v1.0 1354   chr16: 6127079-6128432
evm_27.TU.AmTr_v1.0_scaffold00023.163 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 A. trichopoda v1.0 1047   AmTr_v1.0_scaffold00023: 4402903-4403949
GSMUA_Achr6G08430_001 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 M. acuminata v1 774   chr6: 5609922-5610695
GSMUA_Achr6G16070_001 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 M. acuminata v1 774   chr6: 10726397-10727170
Manes.09G071600 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 M. esculenta v6.1 1190   Chromosome09: 9959875-9961064
Kalax.0329s0060 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 K. laxiflora v1.1 974   scaffold_329: 353902-354875
Kalax.0637s0001 (1 of 2) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 K. laxiflora v1.1 2462   scaffold_637: 5601-8062
Bradi2g25560 (1 of 1) PTHR22763//PTHR22763:SF80 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED B. distachyon v3.1 2193   Bd2: 23632135-23634327
Aco014945 (1 of 1) PTHR22763//PTHR22763:SF80 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED A. comosus v3 2507   LG04: 10811760-10814266
Aqcoe2G170400 (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 A. coerulea v3.1 822   Chr_02: 20569111-20569932

66 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
orange1.1g023542m C. sinensis v1.1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
AT5G02750.1 A. thaliana TAIR10 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Lus10003992 L. usitatissimum v1.0 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Araha.8306s0010.1.p A. halleri v1.1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Medtr1g067260.1 M. truncatula Mt4.0v1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00023.163 A. trichopoda v1.0 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
GSMUA_Achr6P16070_001 M. acuminata v1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
GSMUA_Achr6P08430_001 M. acuminata v1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Kalax.0637s0001.1.p K. laxiflora v1.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Kalax.0329s0060.1.p K. laxiflora v1.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Bradi2g25560.2.p B. distachyon v3.1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Brast08G119800.1.p B. stacei v1.1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Aco014945.1 A. comosus v3 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Aqcoe2G170400.1.p A. coerulea v3.1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
LOC_Os05g33830.1 O. sativa v7.0 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Zosma8g00290.1 Z. marina v2.2 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Kaladp0048s0264.1.p K. fedtschenkoi v1.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Kaladp0087s0201.1.p K. fedtschenkoi v1.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
DCAR_017743 D. carota v2.0 122041904 RING/U-box superfamily protein 3 5273 Angiosperm
DCAR_014952 D. carota v2.0 122041904 RING/U-box superfamily protein 3 5273 Angiosperm
Solyc09g007060.2.1 S. lycopersicum ITAG2.4 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
AUR62029008-RA C. quinoa v1.0 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
AUR62025169-RA C. quinoa v1.0 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Phvul.007G161400.1.p P. vulgaris v2.1 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Potri.016G082500.1.p P. trichocarpa v3.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Podel.16G086100.1.p P. deltoides WV94 v2.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
PGSC0003DMP400019525 S. tuberosum v4.03 122041904 RING/U-box superfamily protein 1 5273 Angiosperm
Pavir.9KG299500.1.p P. virgatum v4.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Pavir.9KG301400.1.p P. virgatum v4.1 122041904 RING/U-box superfamily protein 2 5273 Angiosperm
Oeu035161.1 O. europaea v1.0 122041904 RING/U-box superfamily protein 1 5273 Angiosperm