Gene : Medtr1g067260 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22763:SF20 - E3 LIGASE SHOOT GRAVITROPISM 9 Description:  hypothetical protein
Genomic Order:  3490 Name:  ? Medtr1g067260
Secondary Identifier:  ? PAC:31096760
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g067260 0.5kb upstream 0.5kb upstream 3207 true chr1: 28975486-28978692 Medicago truncatula
Medtr1g067260 0.5kb upstream 0.5kb upstream 500 false chr1: 28978193-28978692 Medicago truncatula
Medtr1g067260 0.5kb downstream 0.5kb downstream 3207 true chr1: 28974986-28978192 Medicago truncatula
Medtr1g067260 0.5kb downstream 0.5kb downstream 500 false chr1: 28974986-28975485 Medicago truncatula
Medtr1g067260 1.0kb upstream 1.0kb upstream 3707 true chr1: 28975486-28979192 Medicago truncatula
Medtr1g067260 1.0kb upstream 1.0kb upstream 1000 false chr1: 28978193-28979192 Medicago truncatula
Medtr1g067260 1.0kb downstream 1.0kb downstream 3707 true chr1: 28974486-28978192 Medicago truncatula
Medtr1g067260 1.0kb downstream 1.0kb downstream 1000 false chr1: 28974486-28975485 Medicago truncatula
Medtr1g067260 2.0kb upstream 2.0kb upstream 4707 true chr1: 28975486-28980192 Medicago truncatula
Medtr1g067260 2.0kb upstream 2.0kb upstream 2000 false chr1: 28978193-28980192 Medicago truncatula
Medtr1g067260 2.0kb downstream 2.0kb downstream 4707 true chr1: 28973486-28978192 Medicago truncatula
Medtr1g067260 2.0kb downstream 2.0kb downstream 2000 false chr1: 28973486-28975485 Medicago truncatula
Medtr1g067260 5.0kb upstream 5.0kb upstream 7707 true chr1: 28975486-28983192 Medicago truncatula
Medtr1g067260 5.0kb upstream 5.0kb upstream 5000 false chr1: 28978193-28983192 Medicago truncatula
Medtr1g067260 5.0kb downstream 5.0kb downstream 7707 true chr1: 28970486-28978192 Medicago truncatula
Medtr1g067260 5.0kb downstream 5.0kb downstream 5000 false chr1: 28970486-28975485 Medicago truncatula
Medtr1g067260 10.0kb upstream 10.0kb upstream 12707 true chr1: 28975486-28988192 Medicago truncatula
Medtr1g067260 10.0kb upstream 10.0kb upstream 10000 false chr1: 28978193-28988192 Medicago truncatula
Medtr1g067260 10.0kb downstream 10.0kb downstream 12707 true chr1: 28965486-28978192 Medicago truncatula
Medtr1g067260 10.0kb downstream 10.0kb downstream 10000 false chr1: 28965486-28975485 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312166 5265 Fabidae View MSA
124063596 5270 Rosid View MSA
123746607 5271 Pentapetalae View MSA
122791525 5272 Eudicot View MSA
122041904 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121309901 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.844        
cufflinks 5.257        
cufflinks 4.774        
cufflinks 0.66        
cufflinks 4.149        
cufflinks 0.244       Low
cufflinks 0.185       Low
cufflinks 4.901        
cufflinks 0.641        

0 Strain