Gene : GSMUA_Achr6G23140_001 M. acuminata v1
Defline:  (1 of 2) PTHR11680:SF10 - SERINE HYDROXYMETHYLTRANSFERASE 1, MITOCHONDRIAL Genomic Order:  2313
Name:  ? GSMUA_Achr6G23140_001 Secondary Identifier:  ? PAC:32318693
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata GLYSYN-PWY Musa acuminata pathologic  
Macuminata PWY-2161 Musa acuminata pathologic  
Macuminata PWY-3841 Musa acuminata pathologic  
Macuminata SER-GLYSYN-PWY Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr6G23140_001 0.5kb upstream 0.5kb upstream 9467 true chr6: 23201798-23211264 Musa acuminata
GSMUA_Achr6G23140_001 0.5kb upstream 0.5kb upstream 500 false chr6: 23210765-23211264 Musa acuminata
GSMUA_Achr6G23140_001 0.5kb downstream 0.5kb downstream 9467 true chr6: 23201298-23210764 Musa acuminata
GSMUA_Achr6G23140_001 0.5kb downstream 0.5kb downstream 500 false chr6: 23201298-23201797 Musa acuminata
GSMUA_Achr6G23140_001 1.0kb upstream 1.0kb upstream 9967 true chr6: 23201798-23211764 Musa acuminata
GSMUA_Achr6G23140_001 1.0kb upstream 1.0kb upstream 1000 false chr6: 23210765-23211764 Musa acuminata
GSMUA_Achr6G23140_001 1.0kb downstream 1.0kb downstream 9967 true chr6: 23200798-23210764 Musa acuminata
GSMUA_Achr6G23140_001 1.0kb downstream 1.0kb downstream 1000 false chr6: 23200798-23201797 Musa acuminata
GSMUA_Achr6G23140_001 2.0kb upstream 2.0kb upstream 10967 true chr6: 23201798-23212764 Musa acuminata
GSMUA_Achr6G23140_001 2.0kb upstream 2.0kb upstream 2000 false chr6: 23210765-23212764 Musa acuminata
GSMUA_Achr6G23140_001 2.0kb downstream 2.0kb downstream 10967 true chr6: 23199798-23210764 Musa acuminata
GSMUA_Achr6G23140_001 2.0kb downstream 2.0kb downstream 2000 false chr6: 23199798-23201797 Musa acuminata
GSMUA_Achr6G23140_001 5.0kb upstream 5.0kb upstream 13967 true chr6: 23201798-23215764 Musa acuminata
GSMUA_Achr6G23140_001 5.0kb upstream 5.0kb upstream 5000 false chr6: 23210765-23215764 Musa acuminata
GSMUA_Achr6G23140_001 5.0kb downstream 5.0kb downstream 13967 true chr6: 23196798-23210764 Musa acuminata
GSMUA_Achr6G23140_001 5.0kb downstream 5.0kb downstream 5000 false chr6: 23196798-23201797 Musa acuminata
GSMUA_Achr6G23140_001 10.0kb upstream 10.0kb upstream 18967 true chr6: 23201798-23220764 Musa acuminata
GSMUA_Achr6G23140_001 10.0kb upstream 10.0kb upstream 10000 false chr6: 23210765-23220764 Musa acuminata
GSMUA_Achr6G23140_001 10.0kb downstream 10.0kb downstream 18967 true chr6: 23191798-23210764 Musa acuminata
GSMUA_Achr6G23140_001 10.0kb downstream 10.0kb downstream 10000 false chr6: 23191798-23201797 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122045639 5273 Angiosperm View MSA
121346714 5274 Embryophyte View MSA
123424879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain