Gene : GSMUA_Achr6G31560_001 M. acuminata v1
Defline:  (1 of 6) 2.5.1.32 - 15-cis-phytoene synthase / PSase Genomic Order:  3153
Name:  ? GSMUA_Achr6G31560_001 Secondary Identifier:  ? PAC:32319998
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata CAROTENOID-PWY Musa acuminata pathologic  
Macuminata PWY-6475 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr6G31560_001 0.5kb upstream 0.5kb upstream 4783 true chr6: 31294343-31299125 Musa acuminata
GSMUA_Achr6G31560_001 0.5kb upstream 0.5kb upstream 500 false chr6: 31298626-31299125 Musa acuminata
GSMUA_Achr6G31560_001 0.5kb downstream 0.5kb downstream 4783 true chr6: 31293843-31298625 Musa acuminata
GSMUA_Achr6G31560_001 0.5kb downstream 0.5kb downstream 500 false chr6: 31293843-31294342 Musa acuminata
GSMUA_Achr6G31560_001 1.0kb upstream 1.0kb upstream 5283 true chr6: 31294343-31299625 Musa acuminata
GSMUA_Achr6G31560_001 1.0kb upstream 1.0kb upstream 1000 false chr6: 31298626-31299625 Musa acuminata
GSMUA_Achr6G31560_001 1.0kb downstream 1.0kb downstream 5283 true chr6: 31293343-31298625 Musa acuminata
GSMUA_Achr6G31560_001 1.0kb downstream 1.0kb downstream 1000 false chr6: 31293343-31294342 Musa acuminata
GSMUA_Achr6G31560_001 2.0kb upstream 2.0kb upstream 6283 true chr6: 31294343-31300625 Musa acuminata
GSMUA_Achr6G31560_001 2.0kb upstream 2.0kb upstream 2000 false chr6: 31298626-31300625 Musa acuminata
GSMUA_Achr6G31560_001 2.0kb downstream 2.0kb downstream 6283 true chr6: 31292343-31298625 Musa acuminata
GSMUA_Achr6G31560_001 2.0kb downstream 2.0kb downstream 2000 false chr6: 31292343-31294342 Musa acuminata
GSMUA_Achr6G31560_001 5.0kb upstream 5.0kb upstream 9283 true chr6: 31294343-31303625 Musa acuminata
GSMUA_Achr6G31560_001 5.0kb upstream 5.0kb upstream 5000 false chr6: 31298626-31303625 Musa acuminata
GSMUA_Achr6G31560_001 5.0kb downstream 5.0kb downstream 9283 true chr6: 31289343-31298625 Musa acuminata
GSMUA_Achr6G31560_001 5.0kb downstream 5.0kb downstream 5000 false chr6: 31289343-31294342 Musa acuminata
GSMUA_Achr6G31560_001 10.0kb upstream 10.0kb upstream 14283 true chr6: 31294343-31308625 Musa acuminata
GSMUA_Achr6G31560_001 10.0kb upstream 10.0kb upstream 10000 false chr6: 31298626-31308625 Musa acuminata
GSMUA_Achr6G31560_001 10.0kb downstream 10.0kb downstream 14283 true chr6: 31284343-31298625 Musa acuminata
GSMUA_Achr6G31560_001 10.0kb downstream 10.0kb downstream 10000 false chr6: 31284343-31294342 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain