Protein Domain : IPR022450

Type:  Family Name:  tRNA N6-adenosine threonylcarbamoyltransferase, TsaD
Description:  This entry represents the TsaD protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. TsaD and its archaeal homologue Kae1 belong to the Kae1/TsaD family , a protein family that appears universal in life, and whose broad function is unknown. A member of Kae1 family has been characterised as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterised members of the TsaD family show O-sialoglycoprotein endopeptidase () activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas (which lack a cell wall). A reasonable hypothesis is that virulence-related activities after export are secondary to a bacterial domain-wide unknown function [, , ].TsaD (also known as Gcp or YgjD) was originally described as a glycoprotease essential for cell viability [] and a critical mediator involved in the modification of cell wall peptidoglycan synthesis and/or cell division []. Gcp is a member of the Kae1/YgjD family, required for the formation of a threonylcarbamoyl group on adenosine at position 37 in tRNAs that read codons beginning with adenine []. Recently YgjD has been renamed as TsaD, and it has been shown that YgjD and proteins YrdC (TsaC), YjeE (TsaE), and YeaZ (TsaB), are necessary and sufficient for t6A biosynthesis in vitro, and may constitute a complex []. Short Name:  TsaD

0 Child Features

1 Contains

DB identifier Type Name
IPR017860 Conserved_site Peptidase M22, conserved site

2 Cross Referencess

Identifier
TIGR03723
MF_01445

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0004222 IPR022450
GO:0002949 IPR022450

2 Ontology Annotations

GO Term Gene Name
GO:0004222 IPR022450
GO:0002949 IPR022450

1 Parent Features

DB identifier Type Name
IPR017861 Family Kae1/TsaD family

496 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
120984 D8SN57 PAC:15418614 Selaginella moellendorffii 431  
evm.model.supercontig_18.102 PAC:16411241 Carica papaya 480  
30174.m008855 B9RD99 PAC:16822500 Ricinus communis 455  
orange1.1g039172m A0A067H1S6 PAC:18136959 Citrus sinensis 477  
AT2G45270.1 O22145 PAC:19640156 Arabidopsis thaliana 480  
Thhalv10001427m V4LHB3 PAC:20188768 Eutrema salsugineum 481  
Lus10030285 PAC:23153186 Linum usitatissimum 399  
Lus10000791 PAC:23168864 Linum usitatissimum 460  
Potri.014G067800.1 B9IBY1 PAC:27034421 Populus trichocarpa 464  
Gorai.004G162900.3 A0A0D2R5T9 PAC:26775163 Gossypium raimondii 437  
Gorai.004G162900.1 A0A0D2QYR6 PAC:26775162 Gossypium raimondii 472  
48195 I0YTB3 PAC:27391864 Coccomyxa subellipsoidea C-169 370  
162482 PAC:27349093 Micromonas pusilla CCMP1545 489  
69157 C1E5A6 PAC:27400014 Micromonas sp RCC299 340  
31766 A4RXP4 PAC:27416754 Ostreococcus lucimarinus 492  
Thecc1EG005535t2 A0A061DTZ4 PAC:27436105 Theobroma cacao 468  
Thecc1EG005535t1 A0A061DTZ4 PAC:27436104 Theobroma cacao 468  
Thecc1EG005535t4 A0A061DTZ4 PAC:27436106 Theobroma cacao 468  
Migut.B01618.2.p PAC:28946747 Mimulus guttatus 469  
Migut.B01618.1.p A0A022QXC9 PAC:28946746 Mimulus guttatus 470  
Araha.11756s0304.1.p PAC:28856245 Arabidopsis halleri 334  
Cagra.0239s0078.1.p PAC:28915446 Capsella grandiflora 479  
Glyma.03G027900.3.p A0A0R0KE37 PAC:30515505 Glycine max 414  
Glyma.03G027900.1.p A0A0R0KE29 PAC:30515504 Glycine max 445  
Bostr.25993s0249.1.p PAC:30667446 Boechera stricta 478  
Medtr4g024920.1 G7JFU1 PAC:31110022 Medicago truncatula 440  
Medtr4g024920.2 A0A072UJ14 PAC:31110021 Medicago truncatula 462  
SapurV1A.0248s0090.1.p PAC:31400383 Salix purpurea 464  
SapurV1A.0248s0090.2.p PAC:31400384 Salix purpurea 463  
Spipo1G0088500 PAC:31521072 Spirodela polyrhiza 448  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1885539
            21285948
            22378793
            15837383
            17237169