Gene : GSMUA_Achr11G22890_001 M. acuminata v1
Defline:  (1 of 3) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  2288
Name:  ? GSMUA_Achr11G22890_001 Secondary Identifier:  ? PAC:32316883
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Macuminata ARO-PWY Musa acuminata pathologic  
Macuminata PWY-6163 Musa acuminata pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
GSMUA_Achr11G22890_001 0.5kb upstream 0.5kb upstream 5358 true chr11: 23028127-23033484 Musa acuminata
GSMUA_Achr11G22890_001 0.5kb upstream 0.5kb upstream 500 false chr11: 23032985-23033484 Musa acuminata
GSMUA_Achr11G22890_001 0.5kb downstream 0.5kb downstream 5358 true chr11: 23027627-23032984 Musa acuminata
GSMUA_Achr11G22890_001 0.5kb downstream 0.5kb downstream 500 false chr11: 23027627-23028126 Musa acuminata
GSMUA_Achr11G22890_001 1.0kb upstream 1.0kb upstream 5858 true chr11: 23028127-23033984 Musa acuminata
GSMUA_Achr11G22890_001 1.0kb upstream 1.0kb upstream 1000 false chr11: 23032985-23033984 Musa acuminata
GSMUA_Achr11G22890_001 1.0kb downstream 1.0kb downstream 5858 true chr11: 23027127-23032984 Musa acuminata
GSMUA_Achr11G22890_001 1.0kb downstream 1.0kb downstream 1000 false chr11: 23027127-23028126 Musa acuminata
GSMUA_Achr11G22890_001 2.0kb upstream 2.0kb upstream 6858 true chr11: 23028127-23034984 Musa acuminata
GSMUA_Achr11G22890_001 2.0kb upstream 2.0kb upstream 2000 false chr11: 23032985-23034984 Musa acuminata
GSMUA_Achr11G22890_001 2.0kb downstream 2.0kb downstream 6858 true chr11: 23026127-23032984 Musa acuminata
GSMUA_Achr11G22890_001 2.0kb downstream 2.0kb downstream 2000 false chr11: 23026127-23028126 Musa acuminata
GSMUA_Achr11G22890_001 5.0kb upstream 5.0kb upstream 9858 true chr11: 23028127-23037984 Musa acuminata
GSMUA_Achr11G22890_001 5.0kb upstream 5.0kb upstream 5000 false chr11: 23032985-23037984 Musa acuminata
GSMUA_Achr11G22890_001 5.0kb downstream 5.0kb downstream 9858 true chr11: 23023127-23032984 Musa acuminata
GSMUA_Achr11G22890_001 5.0kb downstream 5.0kb downstream 5000 false chr11: 23023127-23028126 Musa acuminata
GSMUA_Achr11G22890_001 10.0kb upstream 10.0kb upstream 14858 true chr11: 23028127-23042984 Musa acuminata
GSMUA_Achr11G22890_001 10.0kb upstream 10.0kb upstream 10000 false chr11: 23032985-23042984 Musa acuminata
GSMUA_Achr11G22890_001 10.0kb downstream 10.0kb downstream 14858 true chr11: 23018127-23032984 Musa acuminata
GSMUA_Achr11G22890_001 10.0kb downstream 10.0kb downstream 10000 false chr11: 23018127-23028126 Musa acuminata

3 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041230 5273 Angiosperm View MSA
121346403 5274 Embryophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain