Gene : Manes.09G144600 M. esculenta v6.1
Defline:  (1 of 1) PTHR33970:SF1 - VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC Genomic Order:  1446
Name:  ? Manes.09G144600 Secondary Identifier:  ? PAC:32340670
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta CAROTENOID-PWY Manihot esculenta pathologic  
Mesculenta PWY-5945 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.09G144600 0.5kb upstream 0.5kb upstream 4276 true Chromosome09: 26239634-26243909 Manihot esculenta
Manes.09G144600 0.5kb upstream 0.5kb upstream 500 false Chromosome09: 26243410-26243909 Manihot esculenta
Manes.09G144600 0.5kb downstream 0.5kb downstream 4276 true Chromosome09: 26239134-26243409 Manihot esculenta
Manes.09G144600 0.5kb downstream 0.5kb downstream 500 false Chromosome09: 26239134-26239633 Manihot esculenta
Manes.09G144600 1.0kb upstream 1.0kb upstream 4776 true Chromosome09: 26239634-26244409 Manihot esculenta
Manes.09G144600 1.0kb upstream 1.0kb upstream 1000 false Chromosome09: 26243410-26244409 Manihot esculenta
Manes.09G144600 1.0kb downstream 1.0kb downstream 4776 true Chromosome09: 26238634-26243409 Manihot esculenta
Manes.09G144600 1.0kb downstream 1.0kb downstream 1000 false Chromosome09: 26238634-26239633 Manihot esculenta
Manes.09G144600 2.0kb upstream 2.0kb upstream 5776 true Chromosome09: 26239634-26245409 Manihot esculenta
Manes.09G144600 2.0kb upstream 2.0kb upstream 2000 false Chromosome09: 26243410-26245409 Manihot esculenta
Manes.09G144600 2.0kb downstream 2.0kb downstream 5776 true Chromosome09: 26237634-26243409 Manihot esculenta
Manes.09G144600 2.0kb downstream 2.0kb downstream 2000 false Chromosome09: 26237634-26239633 Manihot esculenta
Manes.09G144600 5.0kb upstream 5.0kb upstream 8776 true Chromosome09: 26239634-26248409 Manihot esculenta
Manes.09G144600 5.0kb upstream 5.0kb upstream 5000 false Chromosome09: 26243410-26248409 Manihot esculenta
Manes.09G144600 5.0kb downstream 5.0kb downstream 8776 true Chromosome09: 26234634-26243409 Manihot esculenta
Manes.09G144600 5.0kb downstream 5.0kb downstream 5000 false Chromosome09: 26234634-26239633 Manihot esculenta
Manes.09G144600 10.0kb upstream 10.0kb upstream 13776 true Chromosome09: 26239634-26253409 Manihot esculenta
Manes.09G144600 10.0kb upstream 10.0kb upstream 10000 false Chromosome09: 26243410-26253409 Manihot esculenta
Manes.09G144600 10.0kb downstream 10.0kb downstream 13776 true Chromosome09: 26229634-26243409 Manihot esculenta
Manes.09G144600 10.0kb downstream 10.0kb downstream 10000 false Chromosome09: 26229634-26239633 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461380 5262 Malpighiales View MSA
124238340 5268 Malvidae View MSA
124063145 5270 Rosid View MSA
123739304 5271 Pentapetalae View MSA
122790516 5272 Eudicot View MSA
122041813 5273 Angiosperm View MSA
121344367 5274 Embryophyte View MSA
123425421 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain