Gene : Manes.09G046000 M. esculenta v6.1
Defline:  (1 of 3) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  460
Name:  ? Manes.09G046000 Secondary Identifier:  ? PAC:32341982
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mesculenta PWY-7511 Manihot esculenta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.09G046000 0.5kb upstream 0.5kb upstream 2113 true Chromosome09: 6162589-6164701 Manihot esculenta
Manes.09G046000 0.5kb upstream 0.5kb upstream 500 false Chromosome09: 6162589-6163088 Manihot esculenta
Manes.09G046000 0.5kb downstream 0.5kb downstream 2113 true Chromosome09: 6163089-6165201 Manihot esculenta
Manes.09G046000 0.5kb downstream 0.5kb downstream 500 false Chromosome09: 6164702-6165201 Manihot esculenta
Manes.09G046000 1.0kb upstream 1.0kb upstream 2613 true Chromosome09: 6162089-6164701 Manihot esculenta
Manes.09G046000 1.0kb upstream 1.0kb upstream 1000 false Chromosome09: 6162089-6163088 Manihot esculenta
Manes.09G046000 1.0kb downstream 1.0kb downstream 2613 true Chromosome09: 6163089-6165701 Manihot esculenta
Manes.09G046000 1.0kb downstream 1.0kb downstream 1000 false Chromosome09: 6164702-6165701 Manihot esculenta
Manes.09G046000 2.0kb upstream 2.0kb upstream 3613 true Chromosome09: 6161089-6164701 Manihot esculenta
Manes.09G046000 2.0kb upstream 2.0kb upstream 2000 false Chromosome09: 6161089-6163088 Manihot esculenta
Manes.09G046000 2.0kb downstream 2.0kb downstream 3613 true Chromosome09: 6163089-6166701 Manihot esculenta
Manes.09G046000 2.0kb downstream 2.0kb downstream 2000 false Chromosome09: 6164702-6166701 Manihot esculenta
Manes.09G046000 5.0kb upstream 5.0kb upstream 6613 true Chromosome09: 6158089-6164701 Manihot esculenta
Manes.09G046000 5.0kb upstream 5.0kb upstream 5000 false Chromosome09: 6158089-6163088 Manihot esculenta
Manes.09G046000 5.0kb downstream 5.0kb downstream 6613 true Chromosome09: 6163089-6169701 Manihot esculenta
Manes.09G046000 5.0kb downstream 5.0kb downstream 5000 false Chromosome09: 6164702-6169701 Manihot esculenta
Manes.09G046000 10.0kb upstream 10.0kb upstream 11613 true Chromosome09: 6153089-6164701 Manihot esculenta
Manes.09G046000 10.0kb upstream 10.0kb upstream 10000 false Chromosome09: 6153089-6163088 Manihot esculenta
Manes.09G046000 10.0kb downstream 10.0kb downstream 11613 true Chromosome09: 6163089-6174701 Manihot esculenta
Manes.09G046000 10.0kb downstream 10.0kb downstream 10000 false Chromosome09: 6164702-6174701 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458557 5262 Malpighiales View MSA
124240092 5268 Malvidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain