Gene : Manes.13G012100 M. esculenta v6.1

Defline:  (1 of 2) PTHR21649:SF13 - LHCA2 PROTEIN Genomic Order:  121
Name:  ? Manes.13G012100 Secondary Identifier:  ? PAC:32339016

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.13G012100 0.5kb upstream 0.5kb upstream 2077 true Chromosome13: 1144121-1146197 Manihot esculenta
Manes.13G012100 0.5kb upstream 0.5kb upstream 500 false Chromosome13: 1145698-1146197 Manihot esculenta
Manes.13G012100 0.5kb downstream 0.5kb downstream 2077 true Chromosome13: 1143621-1145697 Manihot esculenta
Manes.13G012100 0.5kb downstream 0.5kb downstream 500 false Chromosome13: 1143621-1144120 Manihot esculenta
Manes.13G012100 1.0kb upstream 1.0kb upstream 2577 true Chromosome13: 1144121-1146697 Manihot esculenta
Manes.13G012100 1.0kb upstream 1.0kb upstream 1000 false Chromosome13: 1145698-1146697 Manihot esculenta
Manes.13G012100 1.0kb downstream 1.0kb downstream 2577 true Chromosome13: 1143121-1145697 Manihot esculenta
Manes.13G012100 1.0kb downstream 1.0kb downstream 1000 false Chromosome13: 1143121-1144120 Manihot esculenta
Manes.13G012100 2.0kb upstream 2.0kb upstream 3577 true Chromosome13: 1144121-1147697 Manihot esculenta
Manes.13G012100 2.0kb upstream 2.0kb upstream 2000 false Chromosome13: 1145698-1147697 Manihot esculenta
Manes.13G012100 2.0kb downstream 2.0kb downstream 3577 true Chromosome13: 1142121-1145697 Manihot esculenta
Manes.13G012100 2.0kb downstream 2.0kb downstream 2000 false Chromosome13: 1142121-1144120 Manihot esculenta
Manes.13G012100 5.0kb upstream 5.0kb upstream 6577 true Chromosome13: 1144121-1150697 Manihot esculenta
Manes.13G012100 5.0kb upstream 5.0kb upstream 5000 false Chromosome13: 1145698-1150697 Manihot esculenta
Manes.13G012100 5.0kb downstream 5.0kb downstream 6577 true Chromosome13: 1139121-1145697 Manihot esculenta
Manes.13G012100 5.0kb downstream 5.0kb downstream 5000 false Chromosome13: 1139121-1144120 Manihot esculenta
Manes.13G012100 10.0kb upstream 10.0kb upstream 11577 true Chromosome13: 1144121-1155697 Manihot esculenta
Manes.13G012100 10.0kb upstream 10.0kb upstream 10000 false Chromosome13: 1145698-1155697 Manihot esculenta
Manes.13G012100 10.0kb downstream 10.0kb downstream 11577 true Chromosome13: 1134121-1145697 Manihot esculenta
Manes.13G012100 10.0kb downstream 10.0kb downstream 10000 false Chromosome13: 1134121-1144120 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448459 5262 Malpighiales View MSA
124241980 5268 Malvidae View MSA
124065144 5270 Rosid View MSA
123742469 5271 Pentapetalae View MSA
122790167 5272 Eudicot View MSA
122046380 5273 Angiosperm View MSA
121344826 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain