Gene : Manes.15G102100 M. esculenta v6.1

Defline:  (1 of 1) PF00076//PF07145 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Ataxin-2 C-terminal region (PAM2) Genomic Order:  1021
Name:  ? Manes.15G102100 Secondary Identifier:  ? PAC:32351915

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.15G102100 0.5kb upstream 0.5kb upstream 11128 true Chromosome15: 7588970-7600097 Manihot esculenta
Manes.15G102100 0.5kb upstream 0.5kb upstream 500 false Chromosome15: 7599598-7600097 Manihot esculenta
Manes.15G102100 0.5kb downstream 0.5kb downstream 11128 true Chromosome15: 7588470-7599597 Manihot esculenta
Manes.15G102100 0.5kb downstream 0.5kb downstream 500 false Chromosome15: 7588470-7588969 Manihot esculenta
Manes.15G102100 1.0kb upstream 1.0kb upstream 11628 true Chromosome15: 7588970-7600597 Manihot esculenta
Manes.15G102100 1.0kb upstream 1.0kb upstream 1000 false Chromosome15: 7599598-7600597 Manihot esculenta
Manes.15G102100 1.0kb downstream 1.0kb downstream 11628 true Chromosome15: 7587970-7599597 Manihot esculenta
Manes.15G102100 1.0kb downstream 1.0kb downstream 1000 false Chromosome15: 7587970-7588969 Manihot esculenta
Manes.15G102100 2.0kb upstream 2.0kb upstream 12628 true Chromosome15: 7588970-7601597 Manihot esculenta
Manes.15G102100 2.0kb upstream 2.0kb upstream 2000 false Chromosome15: 7599598-7601597 Manihot esculenta
Manes.15G102100 2.0kb downstream 2.0kb downstream 12628 true Chromosome15: 7586970-7599597 Manihot esculenta
Manes.15G102100 2.0kb downstream 2.0kb downstream 2000 false Chromosome15: 7586970-7588969 Manihot esculenta
Manes.15G102100 5.0kb upstream 5.0kb upstream 15628 true Chromosome15: 7588970-7604597 Manihot esculenta
Manes.15G102100 5.0kb upstream 5.0kb upstream 5000 false Chromosome15: 7599598-7604597 Manihot esculenta
Manes.15G102100 5.0kb downstream 5.0kb downstream 15628 true Chromosome15: 7583970-7599597 Manihot esculenta
Manes.15G102100 5.0kb downstream 5.0kb downstream 5000 false Chromosome15: 7583970-7588969 Manihot esculenta
Manes.15G102100 10.0kb upstream 10.0kb upstream 20628 true Chromosome15: 7588970-7609597 Manihot esculenta
Manes.15G102100 10.0kb upstream 10.0kb upstream 10000 false Chromosome15: 7599598-7609597 Manihot esculenta
Manes.15G102100 10.0kb downstream 10.0kb downstream 20628 true Chromosome15: 7578970-7599597 Manihot esculenta
Manes.15G102100 10.0kb downstream 10.0kb downstream 10000 false Chromosome15: 7578970-7588969 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463872 5262 Malpighiales View MSA
124251598 5268 Malvidae View MSA
124064964 5270 Rosid View MSA
123740266 5271 Pentapetalae View MSA
122794524 5272 Eudicot View MSA
122049515 5273 Angiosperm View MSA
121344395 5274 Embryophyte View MSA
123428747 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain