Gene : Manes.S021400 M. esculenta v6.1
Defline:  (1 of 5) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  7
Name:  ? Manes.S021400 Secondary Identifier:  ? PAC:32334784
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Manes.S021400 0.5kb upstream 0.5kb upstream 1493 true Scaffold00636: 191199-192691 Manihot esculenta
Manes.S021400 0.5kb upstream 0.5kb upstream 500 false Scaffold00636: 192192-192691 Manihot esculenta
Manes.S021400 0.5kb downstream 0.5kb downstream 1493 true Scaffold00636: 190699-192191 Manihot esculenta
Manes.S021400 0.5kb downstream 0.5kb downstream 500 false Scaffold00636: 190699-191198 Manihot esculenta
Manes.S021400 1.0kb upstream 1.0kb upstream 1993 true Scaffold00636: 191199-193191 Manihot esculenta
Manes.S021400 1.0kb upstream 1.0kb upstream 1000 false Scaffold00636: 192192-193191 Manihot esculenta
Manes.S021400 1.0kb downstream 1.0kb downstream 1993 true Scaffold00636: 190199-192191 Manihot esculenta
Manes.S021400 1.0kb downstream 1.0kb downstream 1000 false Scaffold00636: 190199-191198 Manihot esculenta
Manes.S021400 2.0kb upstream 2.0kb upstream 2993 true Scaffold00636: 191199-194191 Manihot esculenta
Manes.S021400 2.0kb upstream 2.0kb upstream 2000 false Scaffold00636: 192192-194191 Manihot esculenta
Manes.S021400 2.0kb downstream 2.0kb downstream 2993 true Scaffold00636: 189199-192191 Manihot esculenta
Manes.S021400 2.0kb downstream 2.0kb downstream 2000 false Scaffold00636: 189199-191198 Manihot esculenta
Manes.S021400 5.0kb upstream 5.0kb upstream 5993 true Scaffold00636: 191199-197191 Manihot esculenta
Manes.S021400 5.0kb upstream 5.0kb upstream 5000 false Scaffold00636: 192192-197191 Manihot esculenta
Manes.S021400 5.0kb downstream 5.0kb downstream 5993 true Scaffold00636: 186199-192191 Manihot esculenta
Manes.S021400 5.0kb downstream 5.0kb downstream 5000 false Scaffold00636: 186199-191198 Manihot esculenta
Manes.S021400 10.0kb upstream 10.0kb upstream 10993 true Scaffold00636: 191199-202191 Manihot esculenta
Manes.S021400 10.0kb upstream 10.0kb upstream 10000 false Scaffold00636: 192192-202191 Manihot esculenta
Manes.S021400 10.0kb downstream 10.0kb downstream 10993 true Scaffold00636: 181199-192191 Manihot esculenta
Manes.S021400 10.0kb downstream 10.0kb downstream 10000 false Scaffold00636: 181199-191198 Manihot esculenta

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122464895 5262 Malpighiales View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain