Protein Family : 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 124253979

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  58

58 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29822.t000088 (1 of 3) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase R. communis v0.1 936   29822: 455877-456812
27428.t000005 (1 of 1) PTHR10201//PTHR10201:SF152 - MATRIX METALLOPROTEINASE // SUBFAMILY NOT NAMED R. communis v0.1 681   27428: 39665-40345
orange1.1g035681m.g (1 of 4) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase C. sinensis v1.1 963   scaffold05273: 2717-3679
Ciclev10012543m.g (1 of 3) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase C. clementina v1.0 1021   scaffold_6: 24189856-24190876
Lus10005605.g (1 of 4) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 L. usitatissimum v1.0 870   scaffold211: 162769-163638
Lus10039464.g (1 of 4) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 L. usitatissimum v1.0 864   scaffold33: 1991381-1992244
Lus10032175.g (1 of 4) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 L. usitatissimum v1.0 915   scaffold42: 1230698-1231612
Lus10035221.g (1 of 2) 3.4.24.23 - Matrilysin / Uterine metalloendopeptidase L. usitatissimum v1.0 912   scaffold43: 1144853-1145764
Lus10014512.g (1 of 4) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 L. usitatissimum v1.0 912   scaffold107: 82200-83111
Gorai.001G258900 (1 of 1) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase G. raimondii v2.1 924   Chr01: 53333256-53334179
Gorai.007G077400 (1 of 2) 3.4.24.23 - Matrilysin / Uterine metalloendopeptidase G. raimondii v2.1 977   Chr07: 5483903-5484879
Gorai.007G077600 (1 of 2) 3.4.24.23 - Matrilysin / Uterine metalloendopeptidase G. raimondii v2.1 873   Chr07: 5508358-5509230
Gorai.011G233400 (1 of 6) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase G. raimondii v2.1 1335   Chr11: 55132470-55133804
Thecc1EG043465 (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase T. cacao v1.1 6507   scaffold_10r: 6459699-6466205
Thecc1EG044196 (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase T. cacao v1.1 1410   scaffold_10r: 14533925-14535334
Thecc1EG044201 (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase T. cacao v1.1 1413   scaffold_10r: 14563292-14564704
Thecc1EG046068 (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase T. cacao v1.1 1415   scaffold_32: 8977-10391
Thecc1EG019532 (1 of 2) 3.4.24.23 - Matrilysin / Uterine metalloendopeptidase T. cacao v1.1 3124   scaffold_4: 23153341-23156464
Thecc1EG019528 (1 of 1) K01397 - matrix metalloproteinase-7 (matrilysin, uterine) (MMP7) T. cacao v1.1 1148   scaffold_4: 23142009-23143156
Thecc1EG040549 (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase T. cacao v1.1 2538   scaffold_9: 31438745-31441282
Araha.23208s0005 (1 of 2) 3.4.24.22 - Stromelysin 2 / Transin 2 A. halleri v1.1 743   Scaffold23208: 10741-11483
SapurV1A.2319s0010 (1 of 2) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 S. purpurea v1.0 902   chr17: 18239704-18240605
SapurV1A.1696s0040 (1 of 7) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase S. purpurea v1.0 597   chr19: 9900018-9900614
SapurV1A.2173s0010 (1 of 7) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase S. purpurea v1.0 1238   Scaffold2173: 1706-2943
SapurV1A.2193s0030 (1 of 2) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase S. purpurea v1.0 939   Scaffold2193: 13850-14788
SapurV1A.2193s0040 (1 of 2) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase S. purpurea v1.0 939   Scaffold2193: 24145-25083
SapurV1A.2501s0010 (1 of 7) 3.4.24.12 - Envelysin / Sea-urchin-hatching proteinase S. purpurea v1.0 1233   Scaffold2501: 18421-19653
SapurV1A.0439s0040 (1 of 3) 3.4.24.23 - Matrilysin / Uterine metalloendopeptidase S. purpurea v1.0 939   chr08: 1474828-1475766
Manes.07G092700 (1 of 2) 3.4.24.34 - Neutrophil collagenase / Matrix metalloproteinase 8 M. esculenta v6.1 1152   Chromosome07: 21591562-21592713
Manes.07G092800 (1 of 2) 3.4.24.22 - Stromelysin 2 / Transin 2 M. esculenta v6.1 927   Chromosome07: 21598676-21599602

58 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27428.m000110 R. communis v0.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 2 5268 Malvidae
Lus10005605 L. usitatissimum v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 5 5268 Malvidae
Lus10032175 L. usitatissimum v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 5 5268 Malvidae
Lus10039464 L. usitatissimum v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 5 5268 Malvidae
Gorai.001G258900.1 G. raimondii v2.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 4 5268 Malvidae
Thecc1EG044201t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Thecc1EG019532t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Araha.23208s0005.1.p A. halleri v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 1 5268 Malvidae
SapurV1A.2193s0030.1.p S. purpurea v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Manes.07G092800.1.p M. esculenta v6.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 11 5268 Malvidae
Potri.013G033200.1.p P. trichocarpa v3.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
Potri.019G073700.1.p P. trichocarpa v3.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
Potri.019G073800.1.p P. trichocarpa v3.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
Potri.008G027900.2.p P. trichocarpa v3.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
Potri.008G028000.2.p P. trichocarpa v3.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
Podel.19G076700.1.p P. deltoides WV94 v2.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
Podel.T153000.1.p P. deltoides WV94 v2.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 9 5268 Malvidae
29822.m003413 R. communis v0.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 2 5268 Malvidae
orange1.1g035681m C. sinensis v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 1 5268 Malvidae
Ciclev10012543m C. clementina v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 1 5268 Malvidae
Lus10035221 L. usitatissimum v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 5 5268 Malvidae
Lus10014512 L. usitatissimum v1.0 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 5 5268 Malvidae
Gorai.007G077600.1 G. raimondii v2.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 4 5268 Malvidae
Gorai.011G233400.1 G. raimondii v2.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 4 5268 Malvidae
Gorai.007G077400.1 G. raimondii v2.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 4 5268 Malvidae
Thecc1EG043465t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Thecc1EG019528t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Thecc1EG046068t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Thecc1EG044196t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae
Thecc1EG040549t1 T. cacao v1.1 124253979 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase 7 5268 Malvidae