Gene : Thecc1EG043465 T. cacao v1.1
Defline:  (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  901
Name:  ? Thecc1EG043465 Secondary Identifier:  ? PAC:27441890
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043465 0.5kb upstream 0.5kb upstream 7007 true scaffold_10r: 6459699-6466705 Theobroma cacao
Thecc1EG043465 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 6466206-6466705 Theobroma cacao
Thecc1EG043465 0.5kb downstream 0.5kb downstream 7007 true scaffold_10r: 6459199-6466205 Theobroma cacao
Thecc1EG043465 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 6459199-6459698 Theobroma cacao
Thecc1EG043465 1.0kb upstream 1.0kb upstream 7507 true scaffold_10r: 6459699-6467205 Theobroma cacao
Thecc1EG043465 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 6466206-6467205 Theobroma cacao
Thecc1EG043465 1.0kb downstream 1.0kb downstream 7507 true scaffold_10r: 6458699-6466205 Theobroma cacao
Thecc1EG043465 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 6458699-6459698 Theobroma cacao
Thecc1EG043465 2.0kb upstream 2.0kb upstream 8507 true scaffold_10r: 6459699-6468205 Theobroma cacao
Thecc1EG043465 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 6466206-6468205 Theobroma cacao
Thecc1EG043465 2.0kb downstream 2.0kb downstream 8507 true scaffold_10r: 6457699-6466205 Theobroma cacao
Thecc1EG043465 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 6457699-6459698 Theobroma cacao
Thecc1EG043465 5.0kb upstream 5.0kb upstream 11507 true scaffold_10r: 6459699-6471205 Theobroma cacao
Thecc1EG043465 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 6466206-6471205 Theobroma cacao
Thecc1EG043465 5.0kb downstream 5.0kb downstream 11507 true scaffold_10r: 6454699-6466205 Theobroma cacao
Thecc1EG043465 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 6454699-6459698 Theobroma cacao
Thecc1EG043465 10.0kb upstream 10.0kb upstream 16507 true scaffold_10r: 6459699-6476205 Theobroma cacao
Thecc1EG043465 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 6466206-6476205 Theobroma cacao
Thecc1EG043465 10.0kb downstream 10.0kb downstream 16507 true scaffold_10r: 6449699-6466205 Theobroma cacao
Thecc1EG043465 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 6449699-6459698 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
123826658 5264 Brassicales-Malvales View MSA
124321131 5266 SBM View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain