Gene : Thecc1EG019532 T. cacao v1.1
Defline:  (1 of 2) 3.4.24.23 - Matrilysin / Uterine metalloendopeptidase Genomic Order:  1459
Name:  ? Thecc1EG019532 Secondary Identifier:  ? PAC:27451860
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG019532 0.5kb upstream 0.5kb upstream 3624 true scaffold_4: 23153341-23156964 Theobroma cacao
Thecc1EG019532 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 23156465-23156964 Theobroma cacao
Thecc1EG019532 0.5kb downstream 0.5kb downstream 3624 true scaffold_4: 23152841-23156464 Theobroma cacao
Thecc1EG019532 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 23152841-23153340 Theobroma cacao
Thecc1EG019532 1.0kb upstream 1.0kb upstream 4124 true scaffold_4: 23153341-23157464 Theobroma cacao
Thecc1EG019532 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 23156465-23157464 Theobroma cacao
Thecc1EG019532 1.0kb downstream 1.0kb downstream 4124 true scaffold_4: 23152341-23156464 Theobroma cacao
Thecc1EG019532 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 23152341-23153340 Theobroma cacao
Thecc1EG019532 2.0kb upstream 2.0kb upstream 5124 true scaffold_4: 23153341-23158464 Theobroma cacao
Thecc1EG019532 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 23156465-23158464 Theobroma cacao
Thecc1EG019532 2.0kb downstream 2.0kb downstream 5124 true scaffold_4: 23151341-23156464 Theobroma cacao
Thecc1EG019532 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 23151341-23153340 Theobroma cacao
Thecc1EG019532 5.0kb upstream 5.0kb upstream 8124 true scaffold_4: 23153341-23161464 Theobroma cacao
Thecc1EG019532 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 23156465-23161464 Theobroma cacao
Thecc1EG019532 5.0kb downstream 5.0kb downstream 8124 true scaffold_4: 23148341-23156464 Theobroma cacao
Thecc1EG019532 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 23148341-23153340 Theobroma cacao
Thecc1EG019532 10.0kb upstream 10.0kb upstream 13124 true scaffold_4: 23153341-23166464 Theobroma cacao
Thecc1EG019532 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 23156465-23166464 Theobroma cacao
Thecc1EG019532 10.0kb downstream 10.0kb downstream 13124 true scaffold_4: 23143341-23156464 Theobroma cacao
Thecc1EG019532 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 23143341-23153340 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
123818919 5264 Brassicales-Malvales Singleton cluster - no MSA
124315204 5266 SBM Singleton cluster - no MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain