Gene : Thecc1EG044201 T. cacao v1.1
Defline:  (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  1104
Name:  ? Thecc1EG044201 Secondary Identifier:  ? PAC:27441882
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044201 0.5kb upstream 0.5kb upstream 1913 true scaffold_10r: 14563292-14565204 Theobroma cacao
Thecc1EG044201 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 14564705-14565204 Theobroma cacao
Thecc1EG044201 0.5kb downstream 0.5kb downstream 1913 true scaffold_10r: 14562792-14564704 Theobroma cacao
Thecc1EG044201 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 14562792-14563291 Theobroma cacao
Thecc1EG044201 1.0kb upstream 1.0kb upstream 2413 true scaffold_10r: 14563292-14565704 Theobroma cacao
Thecc1EG044201 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 14564705-14565704 Theobroma cacao
Thecc1EG044201 1.0kb downstream 1.0kb downstream 2413 true scaffold_10r: 14562292-14564704 Theobroma cacao
Thecc1EG044201 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 14562292-14563291 Theobroma cacao
Thecc1EG044201 2.0kb upstream 2.0kb upstream 3413 true scaffold_10r: 14563292-14566704 Theobroma cacao
Thecc1EG044201 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 14564705-14566704 Theobroma cacao
Thecc1EG044201 2.0kb downstream 2.0kb downstream 3413 true scaffold_10r: 14561292-14564704 Theobroma cacao
Thecc1EG044201 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 14561292-14563291 Theobroma cacao
Thecc1EG044201 5.0kb upstream 5.0kb upstream 6413 true scaffold_10r: 14563292-14569704 Theobroma cacao
Thecc1EG044201 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 14564705-14569704 Theobroma cacao
Thecc1EG044201 5.0kb downstream 5.0kb downstream 6413 true scaffold_10r: 14558292-14564704 Theobroma cacao
Thecc1EG044201 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 14558292-14563291 Theobroma cacao
Thecc1EG044201 10.0kb upstream 10.0kb upstream 11413 true scaffold_10r: 14563292-14574704 Theobroma cacao
Thecc1EG044201 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 14564705-14574704 Theobroma cacao
Thecc1EG044201 10.0kb downstream 10.0kb downstream 11413 true scaffold_10r: 14553292-14564704 Theobroma cacao
Thecc1EG044201 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 14553292-14563291 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
123825819 5264 Brassicales-Malvales View MSA
124347441 5266 SBM View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain