Gene : Thecc1EG044196 T. cacao v1.1
Defline:  (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  1102
Name:  ? Thecc1EG044196 Secondary Identifier:  ? PAC:27441709
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG044196 0.5kb upstream 0.5kb upstream 1910 true scaffold_10r: 14533925-14535834 Theobroma cacao
Thecc1EG044196 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 14535335-14535834 Theobroma cacao
Thecc1EG044196 0.5kb downstream 0.5kb downstream 1910 true scaffold_10r: 14533425-14535334 Theobroma cacao
Thecc1EG044196 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 14533425-14533924 Theobroma cacao
Thecc1EG044196 1.0kb upstream 1.0kb upstream 2410 true scaffold_10r: 14533925-14536334 Theobroma cacao
Thecc1EG044196 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 14535335-14536334 Theobroma cacao
Thecc1EG044196 1.0kb downstream 1.0kb downstream 2410 true scaffold_10r: 14532925-14535334 Theobroma cacao
Thecc1EG044196 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 14532925-14533924 Theobroma cacao
Thecc1EG044196 2.0kb upstream 2.0kb upstream 3410 true scaffold_10r: 14533925-14537334 Theobroma cacao
Thecc1EG044196 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 14535335-14537334 Theobroma cacao
Thecc1EG044196 2.0kb downstream 2.0kb downstream 3410 true scaffold_10r: 14531925-14535334 Theobroma cacao
Thecc1EG044196 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 14531925-14533924 Theobroma cacao
Thecc1EG044196 5.0kb upstream 5.0kb upstream 6410 true scaffold_10r: 14533925-14540334 Theobroma cacao
Thecc1EG044196 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 14535335-14540334 Theobroma cacao
Thecc1EG044196 5.0kb downstream 5.0kb downstream 6410 true scaffold_10r: 14528925-14535334 Theobroma cacao
Thecc1EG044196 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 14528925-14533924 Theobroma cacao
Thecc1EG044196 10.0kb upstream 10.0kb upstream 11410 true scaffold_10r: 14533925-14545334 Theobroma cacao
Thecc1EG044196 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 14535335-14545334 Theobroma cacao
Thecc1EG044196 10.0kb downstream 10.0kb downstream 11410 true scaffold_10r: 14523925-14535334 Theobroma cacao
Thecc1EG044196 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 14523925-14533924 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
123825819 5264 Brassicales-Malvales View MSA
124347441 5266 SBM View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain