Gene : SapurV1A.2193s0030 S. purpurea v1.0
Defline:  (1 of 2) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  3
Name:  ? SapurV1A.2193s0030 Secondary Identifier:  ? PAC:31449864
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
SapurV1A.2193s0030 0.5kb upstream 0.5kb upstream 1439 true Scaffold2193: 13350-14788 Salix purpurea
SapurV1A.2193s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold2193: 13350-13849 Salix purpurea
SapurV1A.2193s0030 0.5kb downstream 0.5kb downstream 1439 true Scaffold2193: 13850-15288 Salix purpurea
SapurV1A.2193s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold2193: 14789-15288 Salix purpurea
SapurV1A.2193s0030 1.0kb upstream 1.0kb upstream 1939 true Scaffold2193: 12850-14788 Salix purpurea
SapurV1A.2193s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold2193: 12850-13849 Salix purpurea
SapurV1A.2193s0030 1.0kb downstream 1.0kb downstream 1939 true Scaffold2193: 13850-15788 Salix purpurea
SapurV1A.2193s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold2193: 14789-15788 Salix purpurea
SapurV1A.2193s0030 2.0kb upstream 2.0kb upstream 2939 true Scaffold2193: 11850-14788 Salix purpurea
SapurV1A.2193s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold2193: 11850-13849 Salix purpurea
SapurV1A.2193s0030 2.0kb downstream 2.0kb downstream 2939 true Scaffold2193: 13850-16788 Salix purpurea
SapurV1A.2193s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold2193: 14789-16788 Salix purpurea
SapurV1A.2193s0030 5.0kb upstream 5.0kb upstream 5939 true Scaffold2193: 8850-14788 Salix purpurea
SapurV1A.2193s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold2193: 8850-13849 Salix purpurea
SapurV1A.2193s0030 5.0kb downstream 5.0kb downstream 5939 true Scaffold2193: 13850-19788 Salix purpurea
SapurV1A.2193s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold2193: 14789-19788 Salix purpurea
SapurV1A.2193s0030 10.0kb upstream 10.0kb upstream 10939 true Scaffold2193: 3850-14788 Salix purpurea
SapurV1A.2193s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold2193: 3850-13849 Salix purpurea
SapurV1A.2193s0030 10.0kb downstream 10.0kb downstream 10939 true Scaffold2193: 13850-24788 Salix purpurea
SapurV1A.2193s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold2193: 14789-24788 Salix purpurea

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
122464895 5262 Malpighiales View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain