Gene : Thecc1EG040549 T. cacao v1.1
Defline:  (1 of 6) 3.4.24.7 - Interstitial collagenase / Vertebrate collagenase Genomic Order:  2224
Name:  ? Thecc1EG040549 Secondary Identifier:  ? PAC:27429464
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG040549 0.5kb upstream 0.5kb upstream 3038 true scaffold_9: 31438245-31441282 Theobroma cacao
Thecc1EG040549 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 31438245-31438744 Theobroma cacao
Thecc1EG040549 0.5kb downstream 0.5kb downstream 3038 true scaffold_9: 31438745-31441782 Theobroma cacao
Thecc1EG040549 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 31441283-31441782 Theobroma cacao
Thecc1EG040549 1.0kb upstream 1.0kb upstream 3538 true scaffold_9: 31437745-31441282 Theobroma cacao
Thecc1EG040549 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 31437745-31438744 Theobroma cacao
Thecc1EG040549 1.0kb downstream 1.0kb downstream 3538 true scaffold_9: 31438745-31442282 Theobroma cacao
Thecc1EG040549 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 31441283-31442282 Theobroma cacao
Thecc1EG040549 2.0kb upstream 2.0kb upstream 4538 true scaffold_9: 31436745-31441282 Theobroma cacao
Thecc1EG040549 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 31436745-31438744 Theobroma cacao
Thecc1EG040549 2.0kb downstream 2.0kb downstream 4538 true scaffold_9: 31438745-31443282 Theobroma cacao
Thecc1EG040549 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 31441283-31443282 Theobroma cacao
Thecc1EG040549 5.0kb upstream 5.0kb upstream 7538 true scaffold_9: 31433745-31441282 Theobroma cacao
Thecc1EG040549 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 31433745-31438744 Theobroma cacao
Thecc1EG040549 5.0kb downstream 5.0kb downstream 7538 true scaffold_9: 31438745-31446282 Theobroma cacao
Thecc1EG040549 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 31441283-31446282 Theobroma cacao
Thecc1EG040549 10.0kb upstream 10.0kb upstream 12538 true scaffold_9: 31428745-31441282 Theobroma cacao
Thecc1EG040549 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 31428745-31438744 Theobroma cacao
Thecc1EG040549 10.0kb downstream 10.0kb downstream 12538 true scaffold_9: 31438745-31451282 Theobroma cacao
Thecc1EG040549 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 31441283-31451282 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026255 5273 Angiosperm View MSA
123825819 5264 Brassicales-Malvales View MSA
124347441 5266 SBM View MSA
124253979 5268 Malvidae View MSA
124073759 5270 Rosid View MSA
123750653 5271 Pentapetalae View MSA
122795756 5272 Eudicot View MSA
121350353 5274 Embryophyte View MSA
123381692 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain