Gene : Sevir.3G198100 S. viridis v1.1
Defline:  (1 of 3) PF04195 - Putative gypsy type transposon (Transposase_28) Genomic Order:  1981
Name:  ? Sevir.3G198100 Secondary Identifier:  ? PAC:32679974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G198100 0.5kb upstream 0.5kb upstream 2865 true Chr_03: 14509630-14512494 Setaria viridis
Sevir.3G198100 0.5kb upstream 0.5kb upstream 500 false Chr_03: 14511995-14512494 Setaria viridis
Sevir.3G198100 0.5kb downstream 0.5kb downstream 2865 true Chr_03: 14509130-14511994 Setaria viridis
Sevir.3G198100 0.5kb downstream 0.5kb downstream 500 false Chr_03: 14509130-14509629 Setaria viridis
Sevir.3G198100 1.0kb upstream 1.0kb upstream 3365 true Chr_03: 14509630-14512994 Setaria viridis
Sevir.3G198100 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 14511995-14512994 Setaria viridis
Sevir.3G198100 1.0kb downstream 1.0kb downstream 3365 true Chr_03: 14508630-14511994 Setaria viridis
Sevir.3G198100 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 14508630-14509629 Setaria viridis
Sevir.3G198100 2.0kb upstream 2.0kb upstream 4365 true Chr_03: 14509630-14513994 Setaria viridis
Sevir.3G198100 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 14511995-14513994 Setaria viridis
Sevir.3G198100 2.0kb downstream 2.0kb downstream 4365 true Chr_03: 14507630-14511994 Setaria viridis
Sevir.3G198100 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 14507630-14509629 Setaria viridis
Sevir.3G198100 5.0kb upstream 5.0kb upstream 7365 true Chr_03: 14509630-14516994 Setaria viridis
Sevir.3G198100 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 14511995-14516994 Setaria viridis
Sevir.3G198100 5.0kb downstream 5.0kb downstream 7365 true Chr_03: 14504630-14511994 Setaria viridis
Sevir.3G198100 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 14504630-14509629 Setaria viridis
Sevir.3G198100 10.0kb upstream 10.0kb upstream 12365 true Chr_03: 14509630-14521994 Setaria viridis
Sevir.3G198100 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 14511995-14521994 Setaria viridis
Sevir.3G198100 10.0kb downstream 10.0kb downstream 12365 true Chr_03: 14499630-14511994 Setaria viridis
Sevir.3G198100 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 14499630-14509629 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain