Gene : Sevir.3G398600 S. viridis v1.1
Defline:  (1 of 2) PTHR12446//PTHR12446:SF32 - TESMIN/TSO1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3986
Name:  ? Sevir.3G398600 Secondary Identifier:  ? PAC:32675898
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.3G398600 0.5kb upstream 0.5kb upstream 6655 true Chr_03: 47478153-47484807 Setaria viridis
Sevir.3G398600 0.5kb upstream 0.5kb upstream 500 false Chr_03: 47484308-47484807 Setaria viridis
Sevir.3G398600 0.5kb downstream 0.5kb downstream 6655 true Chr_03: 47477653-47484307 Setaria viridis
Sevir.3G398600 0.5kb downstream 0.5kb downstream 500 false Chr_03: 47477653-47478152 Setaria viridis
Sevir.3G398600 1.0kb upstream 1.0kb upstream 7155 true Chr_03: 47478153-47485307 Setaria viridis
Sevir.3G398600 1.0kb upstream 1.0kb upstream 1000 false Chr_03: 47484308-47485307 Setaria viridis
Sevir.3G398600 1.0kb downstream 1.0kb downstream 7155 true Chr_03: 47477153-47484307 Setaria viridis
Sevir.3G398600 1.0kb downstream 1.0kb downstream 1000 false Chr_03: 47477153-47478152 Setaria viridis
Sevir.3G398600 2.0kb upstream 2.0kb upstream 8155 true Chr_03: 47478153-47486307 Setaria viridis
Sevir.3G398600 2.0kb upstream 2.0kb upstream 2000 false Chr_03: 47484308-47486307 Setaria viridis
Sevir.3G398600 2.0kb downstream 2.0kb downstream 8155 true Chr_03: 47476153-47484307 Setaria viridis
Sevir.3G398600 2.0kb downstream 2.0kb downstream 2000 false Chr_03: 47476153-47478152 Setaria viridis
Sevir.3G398600 5.0kb upstream 5.0kb upstream 11155 true Chr_03: 47478153-47489307 Setaria viridis
Sevir.3G398600 5.0kb upstream 5.0kb upstream 5000 false Chr_03: 47484308-47489307 Setaria viridis
Sevir.3G398600 5.0kb downstream 5.0kb downstream 11155 true Chr_03: 47473153-47484307 Setaria viridis
Sevir.3G398600 5.0kb downstream 5.0kb downstream 5000 false Chr_03: 47473153-47478152 Setaria viridis
Sevir.3G398600 10.0kb upstream 10.0kb upstream 16155 true Chr_03: 47478153-47494307 Setaria viridis
Sevir.3G398600 10.0kb upstream 10.0kb upstream 10000 false Chr_03: 47484308-47494307 Setaria viridis
Sevir.3G398600 10.0kb downstream 10.0kb downstream 16155 true Chr_03: 47468153-47484307 Setaria viridis
Sevir.3G398600 10.0kb downstream 10.0kb downstream 10000 false Chr_03: 47468153-47478152 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.054        
cufflinks 0.542       Low
cufflinks 11.868        
cufflinks 5.336        
cufflinks 0.812       Low
cufflinks 14.643     High  
cufflinks 16.296     High  
cufflinks 12.893     High  
cufflinks 0.536       Low
cufflinks 4.847        
cufflinks 13.461     High  
cufflinks 2.633        
cufflinks 11.91     High  
cufflinks 13.832     High  
cufflinks 0.709       Low
cufflinks 8.164        
cufflinks 10.357        
cufflinks 18.432     High  
cufflinks 17.754     High  

0 Strain