Gene : Sevir.4G299800 S. viridis v1.1
Defline:  (1 of 1) K10802 - high mobility group protein B1 (HMGB1) Genomic Order:  2998
Name:  ? Sevir.4G299800 Secondary Identifier:  ? PAC:32646069
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.4G299800 0.5kb upstream 0.5kb upstream 2255 true Chr_04: 39262080-39264334 Setaria viridis
Sevir.4G299800 0.5kb upstream 0.5kb upstream 500 false Chr_04: 39262080-39262579 Setaria viridis
Sevir.4G299800 0.5kb downstream 0.5kb downstream 2255 true Chr_04: 39262580-39264834 Setaria viridis
Sevir.4G299800 0.5kb downstream 0.5kb downstream 500 false Chr_04: 39264335-39264834 Setaria viridis
Sevir.4G299800 1.0kb upstream 1.0kb upstream 2755 true Chr_04: 39261580-39264334 Setaria viridis
Sevir.4G299800 1.0kb upstream 1.0kb upstream 1000 false Chr_04: 39261580-39262579 Setaria viridis
Sevir.4G299800 1.0kb downstream 1.0kb downstream 2755 true Chr_04: 39262580-39265334 Setaria viridis
Sevir.4G299800 1.0kb downstream 1.0kb downstream 1000 false Chr_04: 39264335-39265334 Setaria viridis
Sevir.4G299800 2.0kb upstream 2.0kb upstream 3755 true Chr_04: 39260580-39264334 Setaria viridis
Sevir.4G299800 2.0kb upstream 2.0kb upstream 2000 false Chr_04: 39260580-39262579 Setaria viridis
Sevir.4G299800 2.0kb downstream 2.0kb downstream 3755 true Chr_04: 39262580-39266334 Setaria viridis
Sevir.4G299800 2.0kb downstream 2.0kb downstream 2000 false Chr_04: 39264335-39266334 Setaria viridis
Sevir.4G299800 5.0kb upstream 5.0kb upstream 6755 true Chr_04: 39257580-39264334 Setaria viridis
Sevir.4G299800 5.0kb upstream 5.0kb upstream 5000 false Chr_04: 39257580-39262579 Setaria viridis
Sevir.4G299800 5.0kb downstream 5.0kb downstream 6755 true Chr_04: 39262580-39269334 Setaria viridis
Sevir.4G299800 5.0kb downstream 5.0kb downstream 5000 false Chr_04: 39264335-39269334 Setaria viridis
Sevir.4G299800 10.0kb upstream 10.0kb upstream 11755 true Chr_04: 39252580-39264334 Setaria viridis
Sevir.4G299800 10.0kb upstream 10.0kb upstream 10000 false Chr_04: 39252580-39262579 Setaria viridis
Sevir.4G299800 10.0kb downstream 10.0kb downstream 11755 true Chr_04: 39262580-39274334 Setaria viridis
Sevir.4G299800 10.0kb downstream 10.0kb downstream 10000 false Chr_04: 39264335-39274334 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 269.595     High  
cufflinks 311.556     High  
cufflinks 324.218     High  
cufflinks 315.196     High  
cufflinks 251.052     High  
cufflinks 392.419     High High
cufflinks 197.764     High Low
cufflinks 245.548     High  
cufflinks 291.504     High  
cufflinks 392.99     High High
cufflinks 312.738     High  
cufflinks 256.951     High  
cufflinks 355.95     High  
cufflinks 380.509     High High
cufflinks 253.704     High  
cufflinks 358.718     High  
cufflinks 193.048     High Low
cufflinks 374.568     High High
cufflinks 349.518     High  

0 Strain