Gene : Sevir.5G074900 S. viridis v1.1
Defline:  (1 of 1) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  749
Name:  ? Sevir.5G074900 Secondary Identifier:  ? PAC:32672018
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G074900 0.5kb upstream 0.5kb upstream 3475 true Chr_05: 5921582-5925056 Setaria viridis
Sevir.5G074900 0.5kb upstream 0.5kb upstream 500 false Chr_05: 5924557-5925056 Setaria viridis
Sevir.5G074900 0.5kb downstream 0.5kb downstream 3475 true Chr_05: 5921082-5924556 Setaria viridis
Sevir.5G074900 0.5kb downstream 0.5kb downstream 500 false Chr_05: 5921082-5921581 Setaria viridis
Sevir.5G074900 1.0kb upstream 1.0kb upstream 3975 true Chr_05: 5921582-5925556 Setaria viridis
Sevir.5G074900 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 5924557-5925556 Setaria viridis
Sevir.5G074900 1.0kb downstream 1.0kb downstream 3975 true Chr_05: 5920582-5924556 Setaria viridis
Sevir.5G074900 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 5920582-5921581 Setaria viridis
Sevir.5G074900 2.0kb upstream 2.0kb upstream 4975 true Chr_05: 5921582-5926556 Setaria viridis
Sevir.5G074900 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 5924557-5926556 Setaria viridis
Sevir.5G074900 2.0kb downstream 2.0kb downstream 4975 true Chr_05: 5919582-5924556 Setaria viridis
Sevir.5G074900 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 5919582-5921581 Setaria viridis
Sevir.5G074900 5.0kb upstream 5.0kb upstream 7975 true Chr_05: 5921582-5929556 Setaria viridis
Sevir.5G074900 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 5924557-5929556 Setaria viridis
Sevir.5G074900 5.0kb downstream 5.0kb downstream 7975 true Chr_05: 5916582-5924556 Setaria viridis
Sevir.5G074900 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 5916582-5921581 Setaria viridis
Sevir.5G074900 10.0kb upstream 10.0kb upstream 12975 true Chr_05: 5921582-5934556 Setaria viridis
Sevir.5G074900 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 5924557-5934556 Setaria viridis
Sevir.5G074900 10.0kb downstream 10.0kb downstream 12975 true Chr_05: 5911582-5924556 Setaria viridis
Sevir.5G074900 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 5911582-5921581 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.087       Low
cufflinks 12.773     High  
cufflinks 12.253        
cufflinks 8.1        
cufflinks 10.776     High  
cufflinks 18.635     High High
cufflinks 9.041        
cufflinks 19.374     High High
cufflinks 10.756     High  
cufflinks 10.635        
cufflinks 15.605     High High
cufflinks 8.21        
cufflinks 8.34        
cufflinks 7.42        
cufflinks 11.376     High  
cufflinks 20.564     High High
cufflinks 4.169       Low
cufflinks 7.343        
cufflinks 8.065        

0 Strain