Gene : Sevir.5G409300 S. viridis v1.1
Defline:  (1 of 242) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 Genomic Order:  4093
Name:  ? Sevir.5G409300 Secondary Identifier:  ? PAC:32670712
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-7511 Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.5G409300 0.5kb upstream 0.5kb upstream 2362 true Chr_05: 41914462-41916823 Setaria viridis
Sevir.5G409300 0.5kb upstream 0.5kb upstream 500 false Chr_05: 41916324-41916823 Setaria viridis
Sevir.5G409300 0.5kb downstream 0.5kb downstream 2362 true Chr_05: 41913962-41916323 Setaria viridis
Sevir.5G409300 0.5kb downstream 0.5kb downstream 500 false Chr_05: 41913962-41914461 Setaria viridis
Sevir.5G409300 1.0kb upstream 1.0kb upstream 2862 true Chr_05: 41914462-41917323 Setaria viridis
Sevir.5G409300 1.0kb upstream 1.0kb upstream 1000 false Chr_05: 41916324-41917323 Setaria viridis
Sevir.5G409300 1.0kb downstream 1.0kb downstream 2862 true Chr_05: 41913462-41916323 Setaria viridis
Sevir.5G409300 1.0kb downstream 1.0kb downstream 1000 false Chr_05: 41913462-41914461 Setaria viridis
Sevir.5G409300 2.0kb upstream 2.0kb upstream 3862 true Chr_05: 41914462-41918323 Setaria viridis
Sevir.5G409300 2.0kb upstream 2.0kb upstream 2000 false Chr_05: 41916324-41918323 Setaria viridis
Sevir.5G409300 2.0kb downstream 2.0kb downstream 3862 true Chr_05: 41912462-41916323 Setaria viridis
Sevir.5G409300 2.0kb downstream 2.0kb downstream 2000 false Chr_05: 41912462-41914461 Setaria viridis
Sevir.5G409300 5.0kb upstream 5.0kb upstream 6862 true Chr_05: 41914462-41921323 Setaria viridis
Sevir.5G409300 5.0kb upstream 5.0kb upstream 5000 false Chr_05: 41916324-41921323 Setaria viridis
Sevir.5G409300 5.0kb downstream 5.0kb downstream 6862 true Chr_05: 41909462-41916323 Setaria viridis
Sevir.5G409300 5.0kb downstream 5.0kb downstream 5000 false Chr_05: 41909462-41914461 Setaria viridis
Sevir.5G409300 10.0kb upstream 10.0kb upstream 11862 true Chr_05: 41914462-41926323 Setaria viridis
Sevir.5G409300 10.0kb upstream 10.0kb upstream 10000 false Chr_05: 41916324-41926323 Setaria viridis
Sevir.5G409300 10.0kb downstream 10.0kb downstream 11862 true Chr_05: 41904462-41916323 Setaria viridis
Sevir.5G409300 10.0kb downstream 10.0kb downstream 10000 false Chr_05: 41904462-41914461 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.159     High High
cufflinks 18.699     High  
cufflinks 22.382     High High
cufflinks 11.802     High  
cufflinks 14.628     High  
cufflinks 16.001     High  
cufflinks 11.808        
cufflinks 25.195     High High
cufflinks 9.392       Low
cufflinks 16.737     High  
cufflinks 21.248     High High
cufflinks 14.028     High  
cufflinks 8.331       Low
cufflinks 11.636     High  
cufflinks 13.908     High  
cufflinks 12.719     High  
cufflinks 20.661     High  
cufflinks 10.771        
cufflinks 8.722       Low

0 Strain