Gene : Sevir.2G312700 S. viridis v1.1
Defline:  (1 of 1) K00767 - nicotinate-nucleotide pyrophosphorylase (carboxylating) (nadC, QPRT) Genomic Order:  3127
Name:  ? Sevir.2G312700 Secondary Identifier:  ? PAC:32638122
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sviridis PWY-5653 Setaria viridis pathologic  
Sviridis PYRIDNUCSYN-PWY Setaria viridis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sevir.2G312700 0.5kb upstream 0.5kb upstream 2949 true Chr_02: 38356355-38359303 Setaria viridis
Sevir.2G312700 0.5kb upstream 0.5kb upstream 500 false Chr_02: 38356355-38356854 Setaria viridis
Sevir.2G312700 0.5kb downstream 0.5kb downstream 2949 true Chr_02: 38356855-38359803 Setaria viridis
Sevir.2G312700 0.5kb downstream 0.5kb downstream 500 false Chr_02: 38359304-38359803 Setaria viridis
Sevir.2G312700 1.0kb upstream 1.0kb upstream 3449 true Chr_02: 38355855-38359303 Setaria viridis
Sevir.2G312700 1.0kb upstream 1.0kb upstream 1000 false Chr_02: 38355855-38356854 Setaria viridis
Sevir.2G312700 1.0kb downstream 1.0kb downstream 3449 true Chr_02: 38356855-38360303 Setaria viridis
Sevir.2G312700 1.0kb downstream 1.0kb downstream 1000 false Chr_02: 38359304-38360303 Setaria viridis
Sevir.2G312700 2.0kb upstream 2.0kb upstream 4449 true Chr_02: 38354855-38359303 Setaria viridis
Sevir.2G312700 2.0kb upstream 2.0kb upstream 2000 false Chr_02: 38354855-38356854 Setaria viridis
Sevir.2G312700 2.0kb downstream 2.0kb downstream 4449 true Chr_02: 38356855-38361303 Setaria viridis
Sevir.2G312700 2.0kb downstream 2.0kb downstream 2000 false Chr_02: 38359304-38361303 Setaria viridis
Sevir.2G312700 5.0kb upstream 5.0kb upstream 7449 true Chr_02: 38351855-38359303 Setaria viridis
Sevir.2G312700 5.0kb upstream 5.0kb upstream 5000 false Chr_02: 38351855-38356854 Setaria viridis
Sevir.2G312700 5.0kb downstream 5.0kb downstream 7449 true Chr_02: 38356855-38364303 Setaria viridis
Sevir.2G312700 5.0kb downstream 5.0kb downstream 5000 false Chr_02: 38359304-38364303 Setaria viridis
Sevir.2G312700 10.0kb upstream 10.0kb upstream 12449 true Chr_02: 38346855-38359303 Setaria viridis
Sevir.2G312700 10.0kb upstream 10.0kb upstream 10000 false Chr_02: 38346855-38356854 Setaria viridis
Sevir.2G312700 10.0kb downstream 10.0kb downstream 12449 true Chr_02: 38356855-38369303 Setaria viridis
Sevir.2G312700 10.0kb downstream 10.0kb downstream 10000 false Chr_02: 38359304-38369303 Setaria viridis

0 Protein Family

19 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18        
cufflinks 14.502     High  
cufflinks 13.736     High  
cufflinks 9.667        
cufflinks 14.845     High High
cufflinks 15.956     High High
cufflinks 7.406       Low
cufflinks 13.228     High  
cufflinks 12.829     High  
cufflinks 11.626     High  
cufflinks 16.334     High High
cufflinks 6.868       Low
cufflinks 11.395     High  
cufflinks 10.857        
cufflinks 11.865     High  
cufflinks 13.849     High  
cufflinks 7.842       Low
cufflinks 10.592        
cufflinks 12.12     High  

0 Strain