Gene : Seita.1G002400 S. italica v2.2
Defline:  (1 of 2) PTHR12136//PTHR12136:SF64 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  24
Name:  ? Seita.1G002400 Secondary Identifier:  ? PAC:32697648
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G002400 0.5kb upstream 0.5kb upstream 5381 true scaffold_1: 170227-175607 Setaria italica
Seita.1G002400 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 170227-170726 Setaria italica
Seita.1G002400 0.5kb downstream 0.5kb downstream 5381 true scaffold_1: 170727-176107 Setaria italica
Seita.1G002400 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 175608-176107 Setaria italica
Seita.1G002400 1.0kb upstream 1.0kb upstream 5881 true scaffold_1: 169727-175607 Setaria italica
Seita.1G002400 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 169727-170726 Setaria italica
Seita.1G002400 1.0kb downstream 1.0kb downstream 5881 true scaffold_1: 170727-176607 Setaria italica
Seita.1G002400 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 175608-176607 Setaria italica
Seita.1G002400 2.0kb upstream 2.0kb upstream 6881 true scaffold_1: 168727-175607 Setaria italica
Seita.1G002400 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 168727-170726 Setaria italica
Seita.1G002400 2.0kb downstream 2.0kb downstream 6881 true scaffold_1: 170727-177607 Setaria italica
Seita.1G002400 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 175608-177607 Setaria italica
Seita.1G002400 5.0kb upstream 5.0kb upstream 9881 true scaffold_1: 165727-175607 Setaria italica
Seita.1G002400 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 165727-170726 Setaria italica
Seita.1G002400 5.0kb downstream 5.0kb downstream 9881 true scaffold_1: 170727-180607 Setaria italica
Seita.1G002400 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 175608-180607 Setaria italica
Seita.1G002400 10.0kb upstream 10.0kb upstream 14881 true scaffold_1: 160727-175607 Setaria italica
Seita.1G002400 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 160727-170726 Setaria italica
Seita.1G002400 10.0kb downstream 10.0kb downstream 14881 true scaffold_1: 170727-185607 Setaria italica
Seita.1G002400 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 175608-185607 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181496 5267 Panicoideae View MSA
124586015 5269 Grass View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111     Low High
cufflinks 0.007     Low  
cufflinks 0.009     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  

0 Strain