Gene : Seita.1G009700 S. italica v2.2
Genomic Order:  97 Name:  ? Seita.1G009700
Secondary Identifier:  ? PAC:32694476
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G009700 0.5kb upstream 0.5kb upstream 1542 true scaffold_1: 738293-739834 Setaria italica
Seita.1G009700 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 738293-738792 Setaria italica
Seita.1G009700 0.5kb downstream 0.5kb downstream 1542 true scaffold_1: 738793-740334 Setaria italica
Seita.1G009700 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 739835-740334 Setaria italica
Seita.1G009700 1.0kb upstream 1.0kb upstream 2042 true scaffold_1: 737793-739834 Setaria italica
Seita.1G009700 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 737793-738792 Setaria italica
Seita.1G009700 1.0kb downstream 1.0kb downstream 2042 true scaffold_1: 738793-740834 Setaria italica
Seita.1G009700 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 739835-740834 Setaria italica
Seita.1G009700 2.0kb upstream 2.0kb upstream 3042 true scaffold_1: 736793-739834 Setaria italica
Seita.1G009700 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 736793-738792 Setaria italica
Seita.1G009700 2.0kb downstream 2.0kb downstream 3042 true scaffold_1: 738793-741834 Setaria italica
Seita.1G009700 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 739835-741834 Setaria italica
Seita.1G009700 5.0kb upstream 5.0kb upstream 6042 true scaffold_1: 733793-739834 Setaria italica
Seita.1G009700 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 733793-738792 Setaria italica
Seita.1G009700 5.0kb downstream 5.0kb downstream 6042 true scaffold_1: 738793-744834 Setaria italica
Seita.1G009700 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 739835-744834 Setaria italica
Seita.1G009700 10.0kb upstream 10.0kb upstream 11042 true scaffold_1: 728793-739834 Setaria italica
Seita.1G009700 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 728793-738792 Setaria italica
Seita.1G009700 10.0kb downstream 10.0kb downstream 11042 true scaffold_1: 738793-749834 Setaria italica
Seita.1G009700 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 739835-749834 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996008 5273 Angiosperm View MSA
122198993 5267 Panicoideae View MSA
124590399 5269 Grass View MSA
121266184 5274 Embryophyte View MSA
123304531 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain