Gene : Seita.1G092100 S. italica v2.2
Defline:  (1 of 1) PTHR10738 - PROTEIN ARGININE N-METHYLTRANSFERASE 5 Genomic Order:  921
Name:  ? Seita.1G092100 Secondary Identifier:  ? PAC:32694336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.1G092100 0.5kb upstream 0.5kb upstream 6846 true scaffold_1: 8138790-8145635 Setaria italica
Seita.1G092100 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8138790-8139289 Setaria italica
Seita.1G092100 0.5kb downstream 0.5kb downstream 6846 true scaffold_1: 8139290-8146135 Setaria italica
Seita.1G092100 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8145636-8146135 Setaria italica
Seita.1G092100 1.0kb upstream 1.0kb upstream 7346 true scaffold_1: 8138290-8145635 Setaria italica
Seita.1G092100 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8138290-8139289 Setaria italica
Seita.1G092100 1.0kb downstream 1.0kb downstream 7346 true scaffold_1: 8139290-8146635 Setaria italica
Seita.1G092100 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8145636-8146635 Setaria italica
Seita.1G092100 2.0kb upstream 2.0kb upstream 8346 true scaffold_1: 8137290-8145635 Setaria italica
Seita.1G092100 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8137290-8139289 Setaria italica
Seita.1G092100 2.0kb downstream 2.0kb downstream 8346 true scaffold_1: 8139290-8147635 Setaria italica
Seita.1G092100 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8145636-8147635 Setaria italica
Seita.1G092100 5.0kb upstream 5.0kb upstream 11346 true scaffold_1: 8134290-8145635 Setaria italica
Seita.1G092100 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8134290-8139289 Setaria italica
Seita.1G092100 5.0kb downstream 5.0kb downstream 11346 true scaffold_1: 8139290-8150635 Setaria italica
Seita.1G092100 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8145636-8150635 Setaria italica
Seita.1G092100 10.0kb upstream 10.0kb upstream 16346 true scaffold_1: 8129290-8145635 Setaria italica
Seita.1G092100 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8129290-8139289 Setaria italica
Seita.1G092100 10.0kb downstream 10.0kb downstream 16346 true scaffold_1: 8139290-8155635 Setaria italica
Seita.1G092100 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8145636-8155635 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040970 5273 Angiosperm View MSA
122175621 5267 Panicoideae View MSA
124574144 5269 Grass View MSA
121345711 5274 Embryophyte View MSA
123425938 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.848        
cufflinks 9.106        
cufflinks 4.921        
cufflinks 2.972       Low
cufflinks 2.997       Low
cufflinks 10.876       High
cufflinks 6.015        
cufflinks 6.736        
cufflinks 7.047        
cufflinks 9.504        
cufflinks 7.942        
cufflinks 8.233        
cufflinks 6.679        
cufflinks 7.128        
cufflinks 8.753        
cufflinks 6.946        
cufflinks 11.023       High
cufflinks 9.853        
cufflinks 2.357       Low
cufflinks 9.673        

0 Strain